Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 YCK2YNL154C 1641 nt2.24□□□□□ -2.05
UFD1P53044 UTP15YMR093W 1542 nt2.23□□□□□ -2.05
UFD1P53044 MST27YGL051W 705 nt2.23□□□□□ -2.05
UFD1P53044 RPC25YKL144C 639 nt2.23□□□□□ -2.05
UFD1P53044 TPK3YKL166C 1197 nt2.23□□□□□ -2.05
UFD1P53044 SRL3YKR091W 741 nt2.23□□□□□ -2.05
UFD1P53044 GRE2YOL151W 1029 nt2.23□□□□□ -2.05
UFD1P53044 JID1YPR061C 906 nt2.23□□□□□ -2.05
UFD1P53044 MED8YBR193C 672 nt2.23□□□□□ -2.05
UFD1P53044 AVT2YEL064C 1443 nt2.23□□□□□ -2.05
UFD1P53044 GIN4YDR507C 3429 nt2.23□□□□□ -2.05
UFD1P53044 ARK1YNL020C 1917 nt2.23□□□□□ -2.05
UFD1P53044 SUL1YBR294W 2580 nt2.22□□□□□ -2.05
UFD1P53044 SLU7YDR088C 1149 nt2.22□□□□□ -2.05
UFD1P53044 YKL066WYKL066W 444 nt2.22□□□□□ -2.05
UFD1P53044 MST28YAR033W 705 nt2.22□□□□□ -2.05
UFD1P53044 RRG7YOR305W 729 nt2.22□□□□□ -2.05
UFD1P53044 GRX5YPL059W 453 nt2.22□□□□□ -2.05
UFD1P53044 SLM4YBR077C 489 nt2.22□□□□□ -2.05
UFD1P53044 RRP15YPR143W 753 nt2.22□□□□□ -2.05
UFD1P53044 ARL1YBR164C 552 nt2.22□□□□□ -2.05
UFD1P53044 ARP8YOR141C 2646 nt2.22□□□□□ -2.05
UFD1P53044 Q0255Q0255 1419 nt2.22□□□□□ -2.05
UFD1P53044 SPF1YEL031W 3648 nt2.22□□□□□ -2.05
UFD1P53044 BOI1YBL085W 2943 nt2.21□□□□□ -2.05
UFD1P53044 YJL132WYJL132W 2253 nt2.21□□□□□ -2.06
UFD1P53044 KRE33YNL132W 3171 nt2.21□□□□□ -2.06
UFD1P53044 BIT61YJL058C 1632 nt2.21□□□□□ -2.06
UFD1P53044 HAA1YPR008W 2085 nt2.21□□□□□ -2.06
UFD1P53044 SRD1YCR018C 666 nt2.21□□□□□ -2.06
UFD1P53044 UBC13YDR092W 462 nt2.21□□□□□ -2.06
UFD1P53044 RAV2YDR202C 1056 nt2.21□□□□□ -2.06
UFD1P53044 TCD1YHR003C 1290 nt2.21□□□□□ -2.06
UFD1P53044 YLL044WYLL044W 447 nt2.21□□□□□ -2.06
UFD1P53044 YLR217WYLR217W 324 nt2.21□□□□□ -2.06
UFD1P53044 YBR287WYBR287W 1284 nt2.21□□□□□ -2.06
UFD1P53044 RLI1YDR091C 1827 nt2.21□□□□□ -2.06
UFD1P53044 YNL193WYNL193W 1677 nt2.21□□□□□ -2.06
UFD1P53044 JJJ2YJL162C 1752 nt2.21□□□□□ -2.06
UFD1P53044 FUS2YMR232W 2034 nt2.2□□□□□ -2.06
UFD1P53044 TOF1YNL273W 3717 nt2.2□□□□□ -2.06
UFD1P53044 YER158W-AYER158W-A 216 nt2.2□□□□□ -2.06
UFD1P53044 CSI2YOL007C 1026 nt2.2□□□□□ -2.06
UFD1P53044 NTC20YBR188C 423 nt2.2□□□□□ -2.06
UFD1P53044 DAD3YBR233W-A 285 nt2.2□□□□□ -2.06
UFD1P53044 SRB4YER022W 2064 nt2.2□□□□□ -2.06
UFD1P53044 YIL080WYIL080W 4722 nt2.2□□□□□ -2.06
UFD1P53044 NEW1YPL226W 3591 nt2.2□□□□□ -2.06
UFD1P53044 CSF1YLR087C 8877 nt2.19□□□□□ -2.06
UFD1P53044 URB2YJR041C 3525 nt2.19□□□□□ -2.06
UFD1P53044 BRE5YNR051C 1548 nt2.19□□□□□ -2.06
UFD1P53044 NSE4YDL105W 1209 nt2.19□□□□□ -2.06
UFD1P53044 YBL029C-AYBL029C-A 285 nt2.19□□□□□ -2.06
UFD1P53044 AIM36YMR157C 768 nt2.19□□□□□ -2.06
UFD1P53044 YPL142CYPL142C 318 nt2.19□□□□□ -2.06
UFD1P53044 RAD18YCR066W 1464 nt2.19□□□□□ -2.06
UFD1P53044 ERT1YBR239C 1590 nt2.19□□□□□ -2.06
UFD1P53044 YDR261W-AYDR261W-A 1317 nt2.18□□□□□ -2.06
UFD1P53044 YPP1YGR198W 2454 nt2.18□□□□□ -2.06
UFD1P53044 BUB1YGR188C 3066 nt2.18□□□□□ -2.06
UFD1P53044 MRP10YDL045W-A 288 nt2.18□□□□□ -2.06
UFD1P53044 SNA4YDL123W 423 nt2.18□□□□□ -2.06
UFD1P53044 YDR262WYDR262W 819 nt2.18□□□□□ -2.06
UFD1P53044 KEI1YDR367W 666 nt2.18□□□□□ -2.06
UFD1P53044 SAE2YGL175C 1038 nt2.18□□□□□ -2.06
UFD1P53044 RSR1YGR152C 819 nt2.18□□□□□ -2.06
UFD1P53044 YJL156W-AYJL156W-A 222 nt2.18□□□□□ -2.06
UFD1P53044 SFT1YKL006C-A 294 nt2.18□□□□□ -2.06
UFD1P53044 YLR154W-EYLR154W-E 204 nt2.18□□□□□ -2.06
UFD1P53044 YMR181CYMR181C 465 nt2.18□□□□□ -2.06
UFD1P53044 ATX1YNL259C 222 nt2.18□□□□□ -2.06
UFD1P53044 YPL276WYPL276W 438 nt2.18□□□□□ -2.06
UFD1P53044 CUR1YPR158W 759 nt2.18□□□□□ -2.06
UFD1P53044 FAR11YNL127W 2862 nt2.18□□□□□ -2.06
UFD1P53044 NAB6YML117W 3405 nt2.17□□□□□ -2.06
UFD1P53044 SLK19YOR195W 2466 nt2.17□□□□□ -2.06
UFD1P53044 CDC37YDR168W 1521 nt2.17□□□□□ -2.06
UFD1P53044 PDR3YBL005W 2931 nt2.17□□□□□ -2.06
UFD1P53044 STE2YFL026W 1296 nt2.17□□□□□ -2.06
UFD1P53044 YGR115CYGR115C 780 nt2.17□□□□□ -2.06
UFD1P53044 RNR2YJL026W 1200 nt2.17□□□□□ -2.06
UFD1P53044 YAL026C-AYAL026C-A 438 nt2.17□□□□□ -2.06
UFD1P53044 YKL165C-AYKL165C-A 234 nt2.17□□□□□ -2.06
UFD1P53044 LIP2YLR239C 987 nt2.17□□□□□ -2.06
UFD1P53044 RPS29AYLR388W 171 nt2.17□□□□□ -2.06
UFD1P53044 PEX17YNL214W 600 nt2.17□□□□□ -2.06
UFD1P53044 NGL1YOL042W 1092 nt2.17□□□□□ -2.06
UFD1P53044 YOR055WYOR055W 435 nt2.17□□□□□ -2.06
UFD1P53044 PTP3YER075C 2787 nt2.17□□□□□ -2.06
UFD1P53044 TFB1YDR311W 1929 nt2.17□□□□□ -2.06
UFD1P53044 PDR11YIL013C 4236 nt2.16□□□□□ -2.06
UFD1P53044 TRS130YMR218C 3309 nt2.16□□□□□ -2.06
UFD1P53044 ANR2YKL047W 1551 nt2.16□□□□□ -2.06
UFD1P53044 LOC1YFR001W 615 nt2.16□□□□□ -2.06
UFD1P53044 RPL11BYGR085C 525 nt2.16□□□□□ -2.06
UFD1P53044 SPO11YHL022C 1197 nt2.16□□□□□ -2.06
UFD1P53044 tW(CCA)G1tW(CCA)G1 72 nt2.16□□□□□ -2.06
UFD1P53044 tW(CCA)G2tW(CCA)G2 72 nt2.16□□□□□ -2.06
UFD1P53044 tW(CCA)JtW(CCA)J 72 nt2.16□□□□□ -2.06
UFD1P53044 tW(CCA)KtW(CCA)K 72 nt2.16□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 133.1 ms