Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	XRS2	YDR369C	2565 nt		3.57	□□□□□ -1.84
CAF16	P43569	FAA2	YER015W	2235 nt		3.56	□□□□□ -1.84
CAF16	P43569	PHO81	YGR233C	3537 nt		3.56	□□□□□ -1.84
CAF16	P43569	PDR12	YPL058C	4536 nt		3.56	□□□□□ -1.84
CAF16	P43569	RTC1	YOL138C	4026 nt		3.56	□□□□□ -1.84
CAF16	P43569	SWF1	YDR126W	1011 nt		3.56	□□□□□ -1.84
CAF16	P43569	YER038W-A	YER038W-A	381 nt		3.56	□□□□□ -1.84
CAF16	P43569	YIL165C	YIL165C	360 nt		3.56	□□□□□ -1.84
CAF16	P43569	NKP2	YLR315W	462 nt		3.56	□□□□□ -1.84
CAF16	P43569	TVP18	YMR071C	504 nt		3.56	□□□□□ -1.84
CAF16	P43569	RAD4	YER162C	2265 nt		3.55	□□□□□ -1.84
CAF16	P43569	REG1	YDR028C	3045 nt		3.55	□□□□□ -1.84
CAF16	P43569	MSH2	YOL090W	2895 nt		3.55	□□□□□ -1.84
CAF16	P43569	YCR081C-A	YCR081C-A	237 nt		3.55	□□□□□ -1.84
CAF16	P43569	SMB1	YER029C	591 nt		3.55	□□□□□ -1.84
CAF16	P43569	LIF1	YGL090W	1266 nt		3.55	□□□□□ -1.84
CAF16	P43569	NBL1	YHR199C-A	222 nt		3.55	□□□□□ -1.84
CAF16	P43569	SDP1	YIL113W	630 nt		3.55	□□□□□ -1.84
CAF16	P43569	YOR392W	YOR392W	444 nt		3.55	□□□□□ -1.84
CAF16	P43569	YPL034W	YPL034W	498 nt		3.55	□□□□□ -1.84
CAF16	P43569	YPR077C	YPR077C	372 nt		3.55	□□□□□ -1.84
CAF16	P43569	YBR285W	YBR285W	435 nt		3.55	□□□□□ -1.84
CAF16	P43569	MNT3	YIL014W	1893 nt		3.55	□□□□□ -1.84
CAF16	P43569	UTP13	YLR222C	2454 nt		3.54	□□□□□ -1.84
CAF16	P43569	BNI4	YNL233W	2679 nt		3.54	□□□□□ -1.84
CAF16	P43569	BYE1	YKL005C	1785 nt		3.54	□□□□□ -1.84
CAF16	P43569	YCR075W-A	YCR075W-A	228 nt		3.54	□□□□□ -1.84
CAF16	P43569	LSM8	YJR022W	330 nt		3.54	□□□□□ -1.84
CAF16	P43569	YLR230W	YLR230W	306 nt		3.54	□□□□□ -1.84
CAF16	P43569	HHT2	YNL031C	411 nt		3.54	□□□□□ -1.84
CAF16	P43569	CHS3	YBR023C	3498 nt		3.54	□□□□□ -1.84
CAF16	P43569	SKN7	YHR206W	1869 nt		3.54	□□□□□ -1.84
CAF16	P43569	STN1	YDR082W	1485 nt		3.54	□□□□□ -1.84
CAF16	P43569	SPT6	YGR116W	4356 nt		3.54	□□□□□ -1.84
CAF16	P43569	SYT1	YPR095C	3681 nt		3.53	□□□□□ -1.84
CAF16	P43569	ATG31	YDR022C	591 nt		3.53	□□□□□ -1.84
CAF16	P43569	YPS5	YGL259W	498 nt		3.53	□□□□□ -1.84
CAF16	P43569	MTC4	YBR255W	2085 nt		3.53	□□□□□ -1.84
CAF16	P43569	GPI17	YDR434W	1605 nt		3.52	□□□□□ -1.85
CAF16	P43569	PES4	YFR023W	1836 nt		3.52	□□□□□ -1.85
CAF16	P43569	ATP22	YDR350C	2055 nt		3.52	□□□□□ -1.85
CAF16	P43569	YLR001C	YLR001C	2589 nt		3.52	□□□□□ -1.85
CAF16	P43569	ELO2	YCR034W	1044 nt		3.52	□□□□□ -1.85
CAF16	P43569	YGR051C	YGR051C	324 nt		3.52	□□□□□ -1.85
CAF16	P43569	CRG1	YHR209W	876 nt		3.52	□□□□□ -1.85
CAF16	P43569	YIL012W	YIL012W	342 nt		3.52	□□□□□ -1.85
CAF16	P43569	YMR105W-A	YMR105W-A	195 nt		3.52	□□□□□ -1.85
CAF16	P43569	RAD14	YMR201C	1116 nt		3.52	□□□□□ -1.85
CAF16	P43569	YOL150C	YOL150C	312 nt		3.52	□□□□□ -1.85
CAF16	P43569	HSP10	YOR020C	321 nt		3.52	□□□□□ -1.85
CAF16	P43569	HEM4	YOR278W	828 nt		3.52	□□□□□ -1.85
CAF16	P43569	PWP2	YCR057C	2772 nt		3.52	□□□□□ -1.85
CAF16	P43569	MYO5	YMR109W	3660 nt		3.51	□□□□□ -1.85
CAF16	P43569	LYP1	YNL268W	1836 nt		3.51	□□□□□ -1.85
CAF16	P43569	RPS23A	YGR118W	438 nt		3.51	□□□□□ -1.85
CAF16	P43569	ECM15	YBL001C	315 nt		3.51	□□□□□ -1.85
CAF16	P43569	NMA111	YNL123W	2994 nt		3.51	□□□□□ -1.85
CAF16	P43569	YBR032W	YBR032W	303 nt		3.51	□□□□□ -1.85
CAF16	P43569	GPX2	YBR244W	489 nt		3.51	□□□□□ -1.85
CAF16	P43569	YKL066W	YKL066W	444 nt		3.5	□□□□□ -1.85
CAF16	P43569	RDN5-1	RDN5-1	121 nt		3.5	□□□□□ -1.85
CAF16	P43569	YLR154W-B	YLR154W-B	165 nt		3.5	□□□□□ -1.85
CAF16	P43569	RDN5-6	RDN5-6	121 nt		3.5	□□□□□ -1.85
CAF16	P43569	YLR287C	YLR287C	1068 nt		3.5	□□□□□ -1.85
CAF16	P43569	ATG33	YLR356W	594 nt		3.5	□□□□□ -1.85
CAF16	P43569	YBL010C	YBL010C	843 nt		3.5	□□□□□ -1.85
CAF16	P43569	YOL134C	YOL134C	390 nt		3.5	□□□□□ -1.85
CAF16	P43569	YHR214C-C	YHR214C-C	1437 nt		3.5	□□□□□ -1.85
CAF16	P43569	ETP1	YHL010C	1758 nt		3.5	□□□□□ -1.85
CAF16	P43569	ZDS2	YML109W	2829 nt		3.5	□□□□□ -1.85
CAF16	P43569	ROD1	YOR018W	2514 nt		3.49	□□□□□ -1.85
CAF16	P43569	AHA1	YDR214W	1053 nt		3.49	□□□□□ -1.85
CAF16	P43569	YGR121W-A	YGR121W-A	216 nt		3.49	□□□□□ -1.85
CAF16	P43569	RPN2	YIL075C	2838 nt		3.49	□□□□□ -1.85
CAF16	P43569	USA1	YML029W	2517 nt		3.48	□□□□□ -1.85
CAF16	P43569	BIT61	YJL058C	1632 nt		3.48	□□□□□ -1.85
CAF16	P43569	ATG21	YPL100W	1491 nt		3.48	□□□□□ -1.85
CAF16	P43569	AVT2	YEL064C	1443 nt		3.48	□□□□□ -1.85
CAF16	P43569	GPI19	YDR437W	423 nt		3.48	□□□□□ -1.85
CAF16	P43569	YER068C-A	YER068C-A	432 nt		3.48	□□□□□ -1.85
CAF16	P43569	RPL29	YFR032C-A	180 nt		3.48	□□□□□ -1.85
CAF16	P43569	RNR4	YGR180C	1038 nt		3.48	□□□□□ -1.85
CAF16	P43569	YJR011C	YJR011C	786 nt		3.48	□□□□□ -1.85
CAF16	P43569	TEN1	YLR010C	483 nt		3.48	□□□□□ -1.85
CAF16	P43569	PAU23	YLR037C	375 nt		3.48	□□□□□ -1.85
CAF16	P43569	LSM2	YBL026W	288 nt		3.48	□□□□□ -1.85
CAF16	P43569	CIN5	YOR028C	888 nt		3.48	□□□□□ -1.85
CAF16	P43569	YPL039W	YPL039W	951 nt		3.48	□□□□□ -1.85
CAF16	P43569	YPL080C	YPL080C	327 nt		3.48	□□□□□ -1.85
CAF16	P43569	SIZ1	YDR409W	2715 nt		3.48	□□□□□ -1.85
CAF16	P43569	ERG5	YMR015C	1617 nt		3.48	□□□□□ -1.85
CAF16	P43569	YDR034C-D	YDR034C-D	5313 nt		3.47	□□□□□ -1.85
CAF16	P43569	VPS3	YDR495C	3036 nt		3.47	□□□□□ -1.85
CAF16	P43569	APE2	YKL157W	2859 nt		3.47	□□□□□ -1.85
CAF16	P43569	YDR194W-A	YDR194W-A	153 nt		3.47	□□□□□ -1.85
CAF16	P43569	YDR431W	YDR431W	312 nt		3.47	□□□□□ -1.85
CAF16	P43569	CDC33	YOL139C	642 nt		3.47	□□□□□ -1.85
CAF16	P43569	YNR063W	YNR063W	1824 nt		3.47	□□□□□ -1.85
CAF16	P43569	PMT6	YGR199W	2280 nt		3.46	□□□□□ -1.85
CAF16	P43569	YJR030C	YJR030C	2238 nt		3.46	□□□□□ -1.86

Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms