Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.68■□□□□ 0.9
HMGCLP35914 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.68■□□□□ 0.9
HMGCLP35914 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.68■□□□□ 0.9
HMGCLP35914 AL162412.1-201ENST00000567129 965 ntBASIC20.68■□□□□ 0.9
HMGCLP35914 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.68■□□□□ 0.9
HMGCLP35914 AC080038.1-201ENST00000611274 1154 ntBASIC20.68■□□□□ 0.9
HMGCLP35914 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
HMGCLP35914 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HMGCLP35914 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.68■□□□□ 0.9
HMGCLP35914 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCLP35914 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HMGCLP35914 AC121338.2-201ENST00000622535 1744 ntBASIC20.67■□□□□ 0.9
HMGCLP35914 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HMGCLP35914 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGCLP35914 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.67■□□□□ 0.9
HMGCLP35914 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 AL591742.1-201ENST00000604433 565 ntBASIC20.67■□□□□ 0.9
HMGCLP35914 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.67■□□□□ 0.9
HMGCLP35914 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCLP35914 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HMGCLP35914 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCLP35914 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCLP35914 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCLP35914 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLP35914 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
HMGCLP35914 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCLP35914 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCLP35914 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.65■□□□□ 0.9
HMGCLP35914 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 PLK5-205ENST00000642079 1969 ntBASIC20.65■□□□□ 0.9
HMGCLP35914 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HMGCLP35914 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCLP35914 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.65■□□□□ 0.9
HMGCLP35914 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 AC073111.5-205ENST00000641717 521 ntBASIC20.65■□□□□ 0.9
HMGCLP35914 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HMGCLP35914 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLP35914 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLP35914 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCLP35914 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCLP35914 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCLP35914 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
HMGCLP35914 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HMGCLP35914 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 CDCA4P2-201ENST00000441182 718 ntBASIC20.64■□□□□ 0.89
HMGCLP35914 CDV3P1-201ENST00000471403 739 ntBASIC20.64■□□□□ 0.89
HMGCLP35914 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HMGCLP35914 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.64■□□□□ 0.89
HMGCLP35914 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.64■□□□□ 0.89
HMGCLP35914 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLP35914 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 AC068338.2-201ENST00000563278 1430 ntBASIC20.63■□□□□ 0.89
HMGCLP35914 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 AC007322.3-201ENST00000426526 701 ntBASIC20.63■□□□□ 0.89
HMGCLP35914 AC007322.1-201ENST00000426983 750 ntBASIC20.63■□□□□ 0.89
HMGCLP35914 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLP35914 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.63■□□□□ 0.89
HMGCLP35914 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLP35914 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms