Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 RIA1YNL163C 3333 nt4.01□□□□□ -1.77
TY1A-ER1P0CX71 EMP70YLR083C 2004 nt4□□□□□ -1.77
TY1A-ER1P0CX71 NUP2YLR335W 2163 nt4□□□□□ -1.77
TY1A-ER1P0CX71 YSW1YBR148W 1830 nt4□□□□□ -1.77
TY1A-ER1P0CX71 ATP22YDR350C 2055 nt4□□□□□ -1.77
TY1A-ER1P0CX71 YGL152CYGL152C 678 nt4□□□□□ -1.77
TY1A-ER1P0CX71 NOP19YGR251W 591 nt4□□□□□ -1.77
TY1A-ER1P0CX71 YJL015CYJL015C 285 nt4□□□□□ -1.77
TY1A-ER1P0CX71 YJL197C-AYJL197C-A 282 nt4□□□□□ -1.77
TY1A-ER1P0CX71 PDS5YMR076C 3834 nt4□□□□□ -1.77
TY1A-ER1P0CX71 YOL097W-AYOL097W-A 186 nt4□□□□□ -1.77
TY1A-ER1P0CX71 OM14YBR230C 405 nt4□□□□□ -1.77
TY1A-ER1P0CX71 YBR230W-AYBR230W-A 201 nt4□□□□□ -1.77
TY1A-ER1P0CX71 SLM6YBR266C 453 nt4□□□□□ -1.77
TY1A-ER1P0CX71 RAD1YPL022W 3303 nt4□□□□□ -1.77
TY1A-ER1P0CX71 MET4YNL103W 2019 nt4□□□□□ -1.77
TY1A-ER1P0CX71 BUD5YCR038C 1929 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 YDR183C-AYDR183C-A 258 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)CtK(CUU)C 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)D1tK(CUU)D1 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)D2tK(CUU)D2 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)E1tK(CUU)E1 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)E2tK(CUU)E2 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)FtK(CUU)F 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)G1tK(CUU)G1 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)G2tK(CUU)G2 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)G3tK(CUU)G3 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)ItK(CUU)I 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)JtK(CUU)J 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)KtK(CUU)K 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)MtK(CUU)M 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 tK(CUU)PtK(CUU)P 73 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 PAU13YHL046C 363 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 MSL1YIR009W 336 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 ECM16YMR128W 3804 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 PHM7YOL084W 2976 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 GAL11YOL051W 3246 nt3.99□□□□□ -1.77
TY1A-ER1P0CX71 MPS1YDL028C 2295 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 YER066C-AYER066C-A 501 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 YHR139C-AYHR139C-A 312 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 YJL202CYJL202C 348 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 FBP1YLR377C 1047 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 YMR046W-AYMR046W-A 129 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 COX7YMR256C 183 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 URA10YMR271C 684 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 PFY1YOR122C 381 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 YKL100CYKL100C 1764 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 YCF1YDR135C 4548 nt3.98□□□□□ -1.77
TY1A-ER1P0CX71 MES1YGR264C 2256 nt3.97□□□□□ -1.77
TY1A-ER1P0CX71 POL1YNL102W 4407 nt3.97□□□□□ -1.77
TY1A-ER1P0CX71 YER091C-AYER091C-A 222 nt3.97□□□□□ -1.77
TY1A-ER1P0CX71 RPS0AYGR214W 759 nt3.97□□□□□ -1.77
TY1A-ER1P0CX71 PET191YJR034W 327 nt3.97□□□□□ -1.77
TY1A-ER1P0CX71 MRPL20YKR085C 588 nt3.97□□□□□ -1.77
TY1A-ER1P0CX71 FCF2YLR051C 654 nt3.97□□□□□ -1.77
TY1A-ER1P0CX71 RPS7BYNL096C 573 nt3.97□□□□□ -1.77
TY1A-ER1P0CX71 SEN1YLR430W 6696 nt3.97□□□□□ -1.77
TY1A-ER1P0CX71 FRE8YLR047C 2061 nt3.96□□□□□ -1.77
TY1A-ER1P0CX71 CAF130YGR134W 3369 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 YOL075CYOL075C 3885 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 RMT2YDR465C 1239 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 RPL29YFR032C-A 180 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 JAC1YGL018C 555 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 RPS21BYJL136C 264 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 LSO1YJR005C-A 282 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 RPL15AYLR029C 615 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 RPL37AYLR185W 267 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 SPC72YAL047C 1869 nt3.96□□□□□ -1.78
TY1A-ER1P0CX71 VHS3YOR054C 2025 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 SSH1YBR283C 1473 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 PRO3YER023W 861 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 PXR1YGR280C 816 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 LSM2YBL026W 288 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 LDS2YOL047C 1071 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 YPL152W-AYPL152W-A 99 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 AKL1YBR059C 3327 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 OSH6YKR003W 1347 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 LYS9YNR050C 1341 nt3.95□□□□□ -1.78
TY1A-ER1P0CX71 PUF3YLL013C 2640 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 NDD1YOR372C 1665 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 NOT5YPR072W 1683 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 MNL1YHR204W 2391 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 YCR097W-AYCR097W-A 267 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 YDR545C-AYDR545C-A 480 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 RIP1YEL024W 648 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 CAJ1YER048C 1176 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 RAD6YGL058W 519 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 tW(UCA)QtW(UCA)Q 74 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 YKL033W-AYKL033W-A 711 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 YNL097W-AYNL097W-A 156 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 YPR077CYPR077C 372 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 TEL1YBL088C 8364 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 YJR015WYJR015W 1533 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 CBP2YHL038C 1893 nt3.94□□□□□ -1.78
TY1A-ER1P0CX71 NRP1YDL167C 2160 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 ATG21YPL100W 1491 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 YDL180WYDL180W 1644 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 YPK9YOR291W 4419 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 PMP3YDR276C 168 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 GAL83YER027C 1254 nt3.93□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 43.3 ms