Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1BO75841 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.11■□□□□ 0.49
UPK1BO75841 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1BO75841 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1BO75841 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UPK1BO75841 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.11■□□□□ 0.49
UPK1BO75841 OR7E47P-201ENST00000546390 1422 ntBASIC18.11■□□□□ 0.49
UPK1BO75841 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1BO75841 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.11■□□□□ 0.49
UPK1BO75841 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1BO75841 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.11■□□□□ 0.49
UPK1BO75841 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1BO75841 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1BO75841 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK1BO75841 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
UPK1BO75841 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK1BO75841 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
UPK1BO75841 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
UPK1BO75841 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1BO75841 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1BO75841 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1BO75841 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.1■□□□□ 0.49
UPK1BO75841 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1BO75841 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UPK1BO75841 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
UPK1BO75841 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1BO75841 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1BO75841 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1BO75841 LONRF2P2-201ENST00000439212 571 ntBASIC18.1■□□□□ 0.49
UPK1BO75841 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.1■□□□□ 0.49
UPK1BO75841 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.1■□□□□ 0.49
UPK1BO75841 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
UPK1BO75841 AC007613.1-201ENST00000572811 2597 ntBASIC18.1■□□□□ 0.49
UPK1BO75841 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK1BO75841 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1BO75841 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.1■□□□□ 0.49
UPK1BO75841 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK1BO75841 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
UPK1BO75841 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.09■□□□□ 0.49
UPK1BO75841 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UPK1BO75841 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1BO75841 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1BO75841 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UPK1BO75841 AC005332.8-201ENST00000622750 2735 ntBASIC18.09■□□□□ 0.49
UPK1BO75841 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.09■□□□□ 0.49
UPK1BO75841 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
UPK1BO75841 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1BO75841 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1BO75841 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.09■□□□□ 0.49
UPK1BO75841 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.09■□□□□ 0.49
UPK1BO75841 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1BO75841 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.09■□□□□ 0.49
UPK1BO75841 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.09■□□□□ 0.49
UPK1BO75841 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1BO75841 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.09■□□□□ 0.49
UPK1BO75841 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1BO75841 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK1BO75841 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UPK1BO75841 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.09■□□□□ 0.49
UPK1BO75841 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.09■□□□□ 0.49
UPK1BO75841 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.08■□□□□ 0.49
UPK1BO75841 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.49
UPK1BO75841 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.08■□□□□ 0.49
UPK1BO75841 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK1BO75841 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
UPK1BO75841 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1BO75841 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1BO75841 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1BO75841 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1BO75841 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UPK1BO75841 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UPK1BO75841 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.08■□□□□ 0.48
UPK1BO75841 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1BO75841 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1BO75841 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1BO75841 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK1BO75841 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UPK1BO75841 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1BO75841 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1BO75841 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UPK1BO75841 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1BO75841 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1BO75841 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1BO75841 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.07■□□□□ 0.48
UPK1BO75841 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.07■□□□□ 0.48
UPK1BO75841 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1BO75841 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.07■□□□□ 0.48
UPK1BO75841 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UPK1BO75841 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1BO75841 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.07■□□□□ 0.48
UPK1BO75841 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms