Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 PSF1YDR013W 627 nt3.15□□□□□ -1.91
TY2A-FP0CX61 YFL065CYFL065C 309 nt3.15□□□□□ -1.91
TY2A-FP0CX61 EAF6YJR082C 342 nt3.15□□□□□ -1.91
TY2A-FP0CX61 NYV1YLR093C 762 nt3.15□□□□□ -1.91
TY2A-FP0CX61 RRT16YNL105W 429 nt3.15□□□□□ -1.91
TY2A-FP0CX61 YNL203CYNL203C 612 nt3.15□□□□□ -1.91
TY2A-FP0CX61 RPL23AYBL087C 414 nt3.15□□□□□ -1.91
TY2A-FP0CX61 EXO5YBR163W 1758 nt3.15□□□□□ -1.91
TY2A-FP0CX61 ARK1YNL020C 1917 nt3.15□□□□□ -1.91
TY2A-FP0CX61 SKO1YNL167C 1944 nt3.15□□□□□ -1.91
TY2A-FP0CX61 YEL1YBL060W 2064 nt3.15□□□□□ -1.91
TY2A-FP0CX61 NOP4YPL043W 2058 nt3.15□□□□□ -1.91
TY2A-FP0CX61 YNR063WYNR063W 1824 nt3.14□□□□□ -1.91
TY2A-FP0CX61 SSP1YHR184W 1716 nt3.14□□□□□ -1.91
TY2A-FP0CX61 MET32YDR253C 576 nt3.14□□□□□ -1.91
TY2A-FP0CX61 YER091C-AYER091C-A 222 nt3.14□□□□□ -1.91
TY2A-FP0CX61 YGR017WYGR017W 894 nt3.14□□□□□ -1.91
TY2A-FP0CX61 ILV5YLR355C 1188 nt3.14□□□□□ -1.91
TY2A-FP0CX61 RIM9YMR063W 720 nt3.14□□□□□ -1.91
TY2A-FP0CX61 NGL1YOL042W 1092 nt3.14□□□□□ -1.91
TY2A-FP0CX61 TOA1YOR194C 861 nt3.14□□□□□ -1.91
TY2A-FP0CX61 SWD3YBR175W 948 nt3.14□□□□□ -1.91
TY2A-FP0CX61 KAP95YLR347C 2586 nt3.14□□□□□ -1.91
TY2A-FP0CX61 SLP1YOR154W 1764 nt3.14□□□□□ -1.91
TY2A-FP0CX61 DNM1YLL001W 2274 nt3.14□□□□□ -1.91
TY2A-FP0CX61 YTA7YGR270W 4140 nt3.14□□□□□ -1.91
TY2A-FP0CX61 DBF20YPR111W 1695 nt3.14□□□□□ -1.91
TY2A-FP0CX61 PKH1YDR490C 2301 nt3.13□□□□□ -1.91
TY2A-FP0CX61 YCR108CYCR108C 192 nt3.13□□□□□ -1.91
TY2A-FP0CX61 YDR442WYDR442W 393 nt3.13□□□□□ -1.91
TY2A-FP0CX61 YER066C-AYER066C-A 501 nt3.13□□□□□ -1.91
TY2A-FP0CX61 YGL159WYGL159W 1113 nt3.13□□□□□ -1.91
TY2A-FP0CX61 BET4YJL031C 984 nt3.13□□□□□ -1.91
TY2A-FP0CX61 MRP8YKL142W 660 nt3.13□□□□□ -1.91
TY2A-FP0CX61 ENV10YLR065C 546 nt3.13□□□□□ -1.91
TY2A-FP0CX61 TAP42YMR028W 1101 nt3.13□□□□□ -1.91
TY2A-FP0CX61 ATP19YOL077W-A 207 nt3.13□□□□□ -1.91
TY2A-FP0CX61 VPS30YPL120W 1674 nt3.13□□□□□ -1.91
TY2A-FP0CX61 RPA135YPR010C 3612 nt3.13□□□□□ -1.91
TY2A-FP0CX61 YKL222CYKL222C 2118 nt3.13□□□□□ -1.91
TY2A-FP0CX61 SMC2YFR031C 3513 nt3.13□□□□□ -1.91
TY2A-FP0CX61 LCB4YOR171C 1875 nt3.12□□□□□ -1.91
TY2A-FP0CX61 YCR090CYCR090C 549 nt3.12□□□□□ -1.91
TY2A-FP0CX61 OPI6YDL096C 327 nt3.12□□□□□ -1.91
TY2A-FP0CX61 tK(UUU)DtK(UUU)D 73 nt3.12□□□□□ -1.91
TY2A-FP0CX61 tK(UUU)G1tK(UUU)G1 73 nt3.12□□□□□ -1.91
TY2A-FP0CX61 tK(UUU)G2tK(UUU)G2 73 nt3.12□□□□□ -1.91
TY2A-FP0CX61 tK(UUU)KtK(UUU)K 73 nt3.12□□□□□ -1.91
TY2A-FP0CX61 tK(UUU)LtK(UUU)L 73 nt3.12□□□□□ -1.91
TY2A-FP0CX61 tK(UUU)OtK(UUU)O 73 nt3.12□□□□□ -1.91
TY2A-FP0CX61 tK(UUU)PtK(UUU)P 73 nt3.12□□□□□ -1.91
TY2A-FP0CX61 YGL082WYGL082W 1146 nt3.12□□□□□ -1.91
TY2A-FP0CX61 BER1YLR412W 825 nt3.12□□□□□ -1.91
TY2A-FP0CX61 GOT1YMR292W 417 nt3.12□□□□□ -1.91
TY2A-FP0CX61 SSN8YNL025C 972 nt3.12□□□□□ -1.91
TY2A-FP0CX61 TIM12YBR091C 330 nt3.12□□□□□ -1.91
TY2A-FP0CX61 HEF3YNL014W 3135 nt3.12□□□□□ -1.91
TY2A-FP0CX61 PBS2YJL128C 2007 nt3.12□□□□□ -1.91
TY2A-FP0CX61 REC8YPR007C 2043 nt3.12□□□□□ -1.91
TY2A-FP0CX61 SNT1YCR033W 3681 nt3.11□□□□□ -1.91
TY2A-FP0CX61 EPL1YFL024C 2499 nt3.11□□□□□ -1.91
TY2A-FP0CX61 ARO1YDR127W 4767 nt3.11□□□□□ -1.91
TY2A-FP0CX61 IRC2YDR112W 309 nt3.11□□□□□ -1.91
TY2A-FP0CX61 YDR199WYDR199W 366 nt3.11□□□□□ -1.91
TY2A-FP0CX61 VAR1Q0140 1197 nt3.11□□□□□ -1.91
TY2A-FP0CX61 MRPL38YKL170W 417 nt3.11□□□□□ -1.91
TY2A-FP0CX61 YLR252WYLR252W 306 nt3.11□□□□□ -1.91
TY2A-FP0CX61 RAD33YML011C 534 nt3.11□□□□□ -1.91
TY2A-FP0CX61 YMR173W-AYMR173W-A 1185 nt3.11□□□□□ -1.91
TY2A-FP0CX61 YMR181CYMR181C 465 nt3.11□□□□□ -1.91
TY2A-FP0CX61 YNL122CYNL122C 348 nt3.11□□□□□ -1.91
TY2A-FP0CX61 ATG3YNR007C 933 nt3.11□□□□□ -1.91
TY2A-FP0CX61 YNR034W-AYNR034W-A 297 nt3.11□□□□□ -1.91
TY2A-FP0CX61 PHO80YOL001W 882 nt3.11□□□□□ -1.91
TY2A-FP0CX61 YOL085W-AYOL085W-A 213 nt3.11□□□□□ -1.91
TY2A-FP0CX61 PET123YOR158W 957 nt3.11□□□□□ -1.91
TY2A-FP0CX61 YOR169CYOR169C 465 nt3.11□□□□□ -1.91
TY2A-FP0CX61 DIA2YOR080W 2199 nt3.11□□□□□ -1.91
TY2A-FP0CX61 YDR179W-AYDR179W-A 1392 nt3.11□□□□□ -1.91
TY2A-FP0CX61 AVT2YEL064C 1443 nt3.1□□□□□ -1.91
TY2A-FP0CX61 EMP70YLR083C 2004 nt3.1□□□□□ -1.91
TY2A-FP0CX61 FAA2YER015W 2235 nt3.1□□□□□ -1.91
TY2A-FP0CX61 GIS2YNL255C 462 nt3.1□□□□□ -1.91
TY2A-FP0CX61 RRI2YOL117W 1938 nt3.1□□□□□ -1.91
TY2A-FP0CX61 YGR027W-BYGR027W-B 5268 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YLR227W-BYLR227W-B 5268 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YPR158C-DYPR158C-D 5268 nt3.09□□□□□ -1.91
TY2A-FP0CX61 PRM8YGL053W 714 nt3.09□□□□□ -1.91
TY2A-FP0CX61 RSR1YGR152C 819 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YHR214C-EYHR214C-E 300 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YIR020CYIR020C 303 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YJR037WYJR037W 384 nt3.09□□□□□ -1.91
TY2A-FP0CX61 VPS51YKR020W 495 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YAR070CYAR070C 300 nt3.09□□□□□ -1.91
TY2A-FP0CX61 TVP18YMR071C 504 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YOR331CYOR331C 558 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YDR210W-BYDR210W-B 5313 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YDR261W-BYDR261W-B 5313 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YFL002W-AYFL002W-A 5313 nt3.09□□□□□ -1.91
TY2A-FP0CX61 YGR161W-BYGR161W-B 5313 nt3.09□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 24.2 ms