Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 MIR4466-201ENST00000606121 54 ntBASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 pRNA.6-201ENST00000610482 90 ntBASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 pRNA.5-201ENST00000612139 90 ntBASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 pRNA.11-201ENST00000618423 90 ntBASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 pRNA.13-201ENST00000619112 90 ntBASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 AC244015.2-201ENST00000616358 1861 ntBASIC15.23■□□□□ 0.03
TRAV8-6A0A0B4J262 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-6A0A0B4J262 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 AL499627.2-201ENST00000606283 725 ntBASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-6A0A0B4J262 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-6A0A0B4J262 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-6A0A0B4J262 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-6A0A0B4J262 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 AL138724.1-201ENST00000606771 1088 ntBASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-6A0A0B4J262 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms