Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
ZC3H6P61129 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZC3H6P61129 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZC3H6P61129 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC28.08■■■□□ 2.09
ZC3H6P61129 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZC3H6P61129 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ZC3H6P61129 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZC3H6P61129 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
ZC3H6P61129 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZC3H6P61129 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ZC3H6P61129 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC28.07■■■□□ 2.08
ZC3H6P61129 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
ZC3H6P61129 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZC3H6P61129 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC28.06■■■□□ 2.08
ZC3H6P61129 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ZC3H6P61129 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ZC3H6P61129 MDFI-202ENST00000373050 809 ntTSL 2 BASIC28.06■■■□□ 2.08
ZC3H6P61129 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ZC3H6P61129 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ZC3H6P61129 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
ZC3H6P61129 AC010331.1-201ENST00000611423 582 ntBASIC28.06■■■□□ 2.08
ZC3H6P61129 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC28.06■■■□□ 2.08
ZC3H6P61129 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ZC3H6P61129 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ZC3H6P61129 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ZC3H6P61129 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ZC3H6P61129 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC28.06■■■□□ 2.08
ZC3H6P61129 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
ZC3H6P61129 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC28.05■■■□□ 2.08
ZC3H6P61129 RPS20-210ENST00000523936 899 ntTSL 2 BASIC28.05■■■□□ 2.08
ZC3H6P61129 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
ZC3H6P61129 KLF2-202ENST00000592003 564 ntTSL 3 BASIC28.05■■■□□ 2.08
ZC3H6P61129 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.05■■■□□ 2.08
ZC3H6P61129 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
ZC3H6P61129 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
ZC3H6P61129 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC28.04■■■□□ 2.08
ZC3H6P61129 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC28.04■■■□□ 2.08
ZC3H6P61129 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ZC3H6P61129 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.04■■■□□ 2.08
ZC3H6P61129 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ZC3H6P61129 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ZC3H6P61129 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC28.04■■■□□ 2.08
ZC3H6P61129 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ZC3H6P61129 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC28.04■■■□□ 2.08
ZC3H6P61129 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC28.04■■■□□ 2.08
ZC3H6P61129 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
ZC3H6P61129 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ZC3H6P61129 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ZC3H6P61129 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC28.04■■■□□ 2.08
ZC3H6P61129 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
ZC3H6P61129 CRK-204ENST00000574295 1391 ntTSL 5 BASIC28.03■■■□□ 2.08
ZC3H6P61129 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
ZC3H6P61129 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ZC3H6P61129 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
ZC3H6P61129 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ZC3H6P61129 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC28.03■■■□□ 2.08
ZC3H6P61129 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ZC3H6P61129 POM121L13P-201ENST00000422362 380 ntBASIC28.03■■■□□ 2.08
ZC3H6P61129 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC28.03■■■□□ 2.08
ZC3H6P61129 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
ZC3H6P61129 KRT18P21-201ENST00000515767 1272 ntBASIC28.03■■■□□ 2.08
ZC3H6P61129 REXO2-216ENST00000544196 452 ntTSL 3 BASIC28.03■■■□□ 2.08
ZC3H6P61129 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ZC3H6P61129 MAX-217ENST00000557277 728 ntTSL 3 BASIC28.03■■■□□ 2.08
ZC3H6P61129 AC092053.2-201ENST00000640557 1818 ntBASIC28.03■■■□□ 2.08
ZC3H6P61129 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ZC3H6P61129 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC28.02■■■□□ 2.08
ZC3H6P61129 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H6P61129 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H6P61129 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H6P61129 NXN-202ENST00000537628 1340 ntTSL 3 BASIC28.02■■■□□ 2.08
ZC3H6P61129 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H6P61129 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H6P61129 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H6P61129 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC28.02■■■□□ 2.08
ZC3H6P61129 TK2-204ENST00000525974 1178 ntTSL 2 BASIC28.02■■■□□ 2.08
ZC3H6P61129 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC28.02■■■□□ 2.08
ZC3H6P61129 LINC01023-201ENST00000606054 436 ntBASIC28.02■■■□□ 2.08
ZC3H6P61129 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC28.02■■■□□ 2.08
ZC3H6P61129 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
ZC3H6P61129 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ZC3H6P61129 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
ZC3H6P61129 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC28.01■■■□□ 2.08
ZC3H6P61129 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC28.01■■■□□ 2.07
ZC3H6P61129 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC28.01■■■□□ 2.07
ZC3H6P61129 ISG20-202ENST00000379224 540 ntTSL 3 BASIC28.01■■■□□ 2.07
ZC3H6P61129 SAPCD2P1-201ENST00000395413 1184 ntBASIC28.01■■■□□ 2.07
ZC3H6P61129 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ZC3H6P61129 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
ZC3H6P61129 TSPY7P-201ENST00000431358 1114 ntBASIC28.01■■■□□ 2.07
ZC3H6P61129 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC28.01■■■□□ 2.07
ZC3H6P61129 BX088651.1-201ENST00000540551 451 ntBASIC28.01■■■□□ 2.07
ZC3H6P61129 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC28.01■■■□□ 2.07
ZC3H6P61129 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
ZC3H6P61129 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
ZC3H6P61129 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC28.01■■■□□ 2.07
ZC3H6P61129 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ZC3H6P61129 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC28.01■■■□□ 2.07
ZC3H6P61129 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC28.01■■■□□ 2.07
ZC3H6P61129 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms