Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 YDR131CYDR131C 1671 nt2.51□□□□□ -2.01
VPS3P23643 PHO91YNR013C 2685 nt2.51□□□□□ -2.01
VPS3P23643 ERG28YER044C 447 nt2.51□□□□□ -2.01
VPS3P23643 TPT1YOL102C 693 nt2.51□□□□□ -2.01
VPS3P23643 UBP15YMR304W 3693 nt2.51□□□□□ -2.01
VPS3P23643 KHA1YJL094C 2622 nt2.51□□□□□ -2.01
VPS3P23643 ARP8YOR141C 2646 nt2.5□□□□□ -2.01
VPS3P23643 YDR336WYDR336W 945 nt2.5□□□□□ -2.01
VPS3P23643 YHR052W-AYHR052W-A 195 nt2.5□□□□□ -2.01
VPS3P23643 YHR054W-AYHR054W-A 195 nt2.5□□□□□ -2.01
VPS3P23643 MMF1YIL051C 438 nt2.5□□□□□ -2.01
VPS3P23643 RIF2YLR453C 1188 nt2.5□□□□□ -2.01
VPS3P23643 PRM6YML047C 1059 nt2.5□□□□□ -2.01
VPS3P23643 PML39YML107C 1005 nt2.5□□□□□ -2.01
VPS3P23643 AIM4YBR194W 372 nt2.5□□□□□ -2.01
VPS3P23643 ERV15YBR210W 429 nt2.5□□□□□ -2.01
VPS3P23643 AMS1YGL156W 3252 nt2.5□□□□□ -2.01
VPS3P23643 POL4YCR014C 1749 nt2.5□□□□□ -2.01
VPS3P23643 AI4Q0065 1671 nt2.5□□□□□ -2.01
VPS3P23643 YNL193WYNL193W 1677 nt2.5□□□□□ -2.01
VPS3P23643 MLH1YMR167W 2310 nt2.5□□□□□ -2.01
VPS3P23643 VTC1YER072W 390 nt2.49□□□□□ -2.01
VPS3P23643 RSR1YGR152C 819 nt2.49□□□□□ -2.01
VPS3P23643 PFS1YHR185C 714 nt2.49□□□□□ -2.01
VPS3P23643 YIL102C-AYIL102C-A 228 nt2.49□□□□□ -2.01
VPS3P23643 YLL047WYLL047W 384 nt2.49□□□□□ -2.01
VPS3P23643 GAB1YLR459W 1185 nt2.49□□□□□ -2.01
VPS3P23643 BET5YML077W 480 nt2.49□□□□□ -2.01
VPS3P23643 MAK5YBR142W 2322 nt2.49□□□□□ -2.01
VPS3P23643 CSF1YLR087C 8877 nt2.49□□□□□ -2.01
VPS3P23643 SWA2YDR320C 2007 nt2.49□□□□□ -2.01
VPS3P23643 SLY41YOR307C 1362 nt2.49□□□□□ -2.01
VPS3P23643 PEX5YDR244W 1839 nt2.48□□□□□ -2.01
VPS3P23643 YIL068W-AYIL068W-A 384 nt2.48□□□□□ -2.01
VPS3P23643 YJL169WYJL169W 369 nt2.48□□□□□ -2.01
VPS3P23643 SRL3YKR091W 741 nt2.48□□□□□ -2.01
VPS3P23643 RPL25YOL127W 429 nt2.48□□□□□ -2.01
VPS3P23643 YOL134CYOL134C 390 nt2.48□□□□□ -2.01
VPS3P23643 GCD10YNL062C 1437 nt2.48□□□□□ -2.01
VPS3P23643 UTP15YMR093W 1542 nt2.47□□□□□ -2.01
VPS3P23643 YCR064CYCR064C 411 nt2.47□□□□□ -2.01
VPS3P23643 NOP19YGR251W 591 nt2.47□□□□□ -2.01
VPS3P23643 YHL006W-AYHL006W-A 354 nt2.47□□□□□ -2.01
VPS3P23643 MET14YKL001C 609 nt2.47□□□□□ -2.01
VPS3P23643 SFT1YKL006C-A 294 nt2.47□□□□□ -2.01
VPS3P23643 MST28YAR033W 705 nt2.47□□□□□ -2.01
VPS3P23643 YNL234WYNL234W 1281 nt2.47□□□□□ -2.01
VPS3P23643 PDR17YNL264C 1053 nt2.47□□□□□ -2.01
VPS3P23643 JID1YPR061C 906 nt2.47□□□□□ -2.01
VPS3P23643 DPB3YBR278W 606 nt2.47□□□□□ -2.01
VPS3P23643 ARP9YMR033W 1404 nt2.47□□□□□ -2.01
VPS3P23643 REV3YPL167C 4515 nt2.47□□□□□ -2.01
VPS3P23643 MSB1YOR188W 3414 nt2.47□□□□□ -2.01
VPS3P23643 URK1YNR012W 1506 nt2.47□□□□□ -2.01
VPS3P23643 YLR108CYLR108C 1458 nt2.46□□□□□ -2.02
VPS3P23643 SCD5YOR329C 2619 nt2.46□□□□□ -2.02
VPS3P23643 MRP10YDL045W-A 288 nt2.46□□□□□ -2.02
VPS3P23643 YRB1YDR002W 606 nt2.46□□□□□ -2.02
VPS3P23643 AAD16YFL057C 459 nt2.46□□□□□ -2.02
VPS3P23643 RPA12YJR063W 378 nt2.46□□□□□ -2.02
VPS3P23643 YKL070WYKL070W 510 nt2.46□□□□□ -2.02
VPS3P23643 ADI1YMR009W 540 nt2.46□□□□□ -2.02
VPS3P23643 SPB1YCL054W 2526 nt2.46□□□□□ -2.02
VPS3P23643 AGE1YDR524C 1449 nt2.45□□□□□ -2.02
VPS3P23643 AI3Q0060 1248 nt2.45□□□□□ -2.02
VPS3P23643 MFA1YDR461W 111 nt2.45□□□□□ -2.02
VPS3P23643 PPE1YHR075C 1203 nt2.45□□□□□ -2.02
VPS3P23643 PET191YJR034W 327 nt2.45□□□□□ -2.02
VPS3P23643 ATG16YMR159C 453 nt2.45□□□□□ -2.02
VPS3P23643 FPR1YNL135C 345 nt2.45□□□□□ -2.02
VPS3P23643 YOL118CYOL118C 309 nt2.45□□□□□ -2.02
VPS3P23643 YBR201C-AYBR201C-A 204 nt2.45□□□□□ -2.02
VPS3P23643 SCY1YGL083W 2415 nt2.44□□□□□ -2.02
VPS3P23643 COG2YGR120C 789 nt2.44□□□□□ -2.02
VPS3P23643 YHR182C-AYHR182C-A 474 nt2.44□□□□□ -2.02
VPS3P23643 YIR036W-AYIR036W-A 402 nt2.44□□□□□ -2.02
VPS3P23643 TFB1YDR311W 1929 nt2.44□□□□□ -2.02
VPS3P23643 VPS13YLL040C 9435 nt2.43□□□□□ -2.02
VPS3P23643 EDS1YBR033W 2760 nt2.43□□□□□ -2.02
VPS3P23643 SNU23YDL098C 585 nt2.43□□□□□ -2.02
VPS3P23643 YGR050CYGR050C 357 nt2.43□□□□□ -2.02
VPS3P23643 YGR111WYGR111W 1203 nt2.43□□□□□ -2.02
VPS3P23643 YAL034C-BYAL034C-B 354 nt2.43□□□□□ -2.02
VPS3P23643 YAL042C-AYAL042C-A 378 nt2.43□□□□□ -2.02
VPS3P23643 SAS2YMR127C 1017 nt2.43□□□□□ -2.02
VPS3P23643 TSR4YOL022C 1227 nt2.43□□□□□ -2.02
VPS3P23643 PEX15YOL044W 1152 nt2.43□□□□□ -2.02
VPS3P23643 GRX7YBR014C 612 nt2.43□□□□□ -2.02
VPS3P23643 ICS2YBR157C 768 nt2.43□□□□□ -2.02
VPS3P23643 SVL3YPL032C 2478 nt2.42□□□□□ -2.02
VPS3P23643 DBF20YPR111W 1695 nt2.42□□□□□ -2.02
VPS3P23643 YFH1YDL120W 525 nt2.42□□□□□ -2.02
VPS3P23643 HLR1YDR528W 1272 nt2.42□□□□□ -2.02
VPS3P23643 TDA10YGR205W 873 nt2.42□□□□□ -2.02
VPS3P23643 BET3YKR068C 582 nt2.42□□□□□ -2.02
VPS3P23643 YLR154W-EYLR154W-E 204 nt2.42□□□□□ -2.02
VPS3P23643 LIP2YLR239C 987 nt2.42□□□□□ -2.02
VPS3P23643 YLR412C-AYLR412C-A 207 nt2.42□□□□□ -2.02
VPS3P23643 SRT1YMR101C 1032 nt2.42□□□□□ -2.02
VPS3P23643 YNL276CYNL276C 396 nt2.42□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms