Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.32■□□□□ 0.84
THSD1Q9NS62 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 AL137060.1-201ENST00000618151 2648 ntBASIC20.32■□□□□ 0.84
THSD1Q9NS62 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.32■□□□□ 0.84
THSD1Q9NS62 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
THSD1Q9NS62 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.32■□□□□ 0.84
THSD1Q9NS62 CYP2T1P-201ENST00000432607 1285 ntBASIC20.32■□□□□ 0.84
THSD1Q9NS62 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
THSD1Q9NS62 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
THSD1Q9NS62 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.32■□□□□ 0.84
THSD1Q9NS62 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THSD1Q9NS62 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
THSD1Q9NS62 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
THSD1Q9NS62 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
THSD1Q9NS62 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
THSD1Q9NS62 OR10C1-204ENST00000622521 1039 ntBASIC20.31■□□□□ 0.84
THSD1Q9NS62 AP006294.2-201ENST00000641667 209 ntBASIC20.31■□□□□ 0.84
THSD1Q9NS62 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
THSD1Q9NS62 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
THSD1Q9NS62 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.3■□□□□ 0.84
THSD1Q9NS62 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
THSD1Q9NS62 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
THSD1Q9NS62 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
THSD1Q9NS62 PRORSD1P-201ENST00000295112 541 ntBASIC20.3■□□□□ 0.84
THSD1Q9NS62 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
THSD1Q9NS62 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
THSD1Q9NS62 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.3■□□□□ 0.84
THSD1Q9NS62 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.3■□□□□ 0.84
THSD1Q9NS62 AC069236.1-201ENST00000604339 616 ntBASIC20.3■□□□□ 0.84
THSD1Q9NS62 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.3■□□□□ 0.84
THSD1Q9NS62 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
THSD1Q9NS62 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.3■□□□□ 0.84
THSD1Q9NS62 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.3■□□□□ 0.84
THSD1Q9NS62 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.3■□□□□ 0.84
THSD1Q9NS62 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
THSD1Q9NS62 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.29■□□□□ 0.84
THSD1Q9NS62 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.29■□□□□ 0.84
THSD1Q9NS62 AC068338.2-201ENST00000563278 1430 ntBASIC20.29■□□□□ 0.84
THSD1Q9NS62 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
THSD1Q9NS62 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.29■□□□□ 0.84
THSD1Q9NS62 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
THSD1Q9NS62 AC007322.4-201ENST00000509611 723 ntBASIC20.29■□□□□ 0.84
THSD1Q9NS62 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.29■□□□□ 0.84
THSD1Q9NS62 AC092118.2-201ENST00000613495 667 ntBASIC20.29■□□□□ 0.84
THSD1Q9NS62 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
THSD1Q9NS62 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
THSD1Q9NS62 AC010542.4-201ENST00000563151 1910 ntBASIC20.29■□□□□ 0.84
THSD1Q9NS62 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
THSD1Q9NS62 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.29■□□□□ 0.84
THSD1Q9NS62 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
THSD1Q9NS62 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.28■□□□□ 0.84
THSD1Q9NS62 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.28■□□□□ 0.84
THSD1Q9NS62 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.28■□□□□ 0.84
THSD1Q9NS62 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.28■□□□□ 0.84
THSD1Q9NS62 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.28■□□□□ 0.84
THSD1Q9NS62 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.28■□□□□ 0.84
THSD1Q9NS62 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
THSD1Q9NS62 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.27■□□□□ 0.84
THSD1Q9NS62 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
THSD1Q9NS62 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
THSD1Q9NS62 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
THSD1Q9NS62 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THSD1Q9NS62 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THSD1Q9NS62 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.27■□□□□ 0.84
THSD1Q9NS62 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THSD1Q9NS62 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THSD1Q9NS62 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THSD1Q9NS62 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.27■□□□□ 0.84
THSD1Q9NS62 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.27■□□□□ 0.84
THSD1Q9NS62 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.27■□□□□ 0.84
THSD1Q9NS62 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.27■□□□□ 0.84
THSD1Q9NS62 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms