Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 CTF13YMR094W 1437 nt3.44□□□□□ -1.86
RPN11P43588 YNL284C-AYNL284C-A 1323 nt3.44□□□□□ -1.86
RPN11P43588 VTC3YPL019C 2508 nt3.43□□□□□ -1.86
RPN11P43588 SHE9YDR393W 1371 nt3.43□□□□□ -1.86
RPN11P43588 snR5snR5 204 nt3.43□□□□□ -1.86
RPN11P43588 CRD1YDL142C 852 nt3.43□□□□□ -1.86
RPN11P43588 SLD5YDR489W 885 nt3.43□□□□□ -1.86
RPN11P43588 VAB2YEL005C 849 nt3.43□□□□□ -1.86
RPN11P43588 COG2YGR120C 789 nt3.43□□□□□ -1.86
RPN11P43588 YIP1YGR172C 747 nt3.43□□□□□ -1.86
RPN11P43588 RPS21AYKR057W 264 nt3.43□□□□□ -1.86
RPN11P43588 BET3YKR068C 582 nt3.43□□□□□ -1.86
RPN11P43588 PBA1YLR199C 831 nt3.43□□□□□ -1.86
RPN11P43588 YLR400WYLR400W 474 nt3.43□□□□□ -1.86
RPN11P43588 INP1YMR204C 1263 nt3.43□□□□□ -1.86
RPN11P43588 ARF3YOR094W 552 nt3.43□□□□□ -1.86
RPN11P43588 DPB3YBR278W 606 nt3.43□□□□□ -1.86
RPN11P43588 REV3YPL167C 4515 nt3.43□□□□□ -1.86
RPN11P43588 TRK1YJL129C 3708 nt3.43□□□□□ -1.86
RPN11P43588 YDR210W-AYDR210W-A 1317 nt3.43□□□□□ -1.86
RPN11P43588 PIN4YBL051C 2007 nt3.43□□□□□ -1.86
RPN11P43588 SRC1YML034W 2505 nt3.42□□□□□ -1.86
RPN11P43588 AEP2YMR282C 1743 nt3.42□□□□□ -1.86
RPN11P43588 DIG2YDR480W 972 nt3.42□□□□□ -1.86
RPN11P43588 APQ13YJL075C 417 nt3.42□□□□□ -1.86
RPN11P43588 YKL069WYKL069W 543 nt3.42□□□□□ -1.86
RPN11P43588 EMC6YLL014W 327 nt3.42□□□□□ -1.86
RPN11P43588 RAD33YML011C 534 nt3.42□□□□□ -1.86
RPN11P43588 FLO9YAL063C 3969 nt3.42□□□□□ -1.86
RPN11P43588 FLO1YAR050W 4614 nt3.42□□□□□ -1.86
RPN11P43588 FMP25YLR077W 1752 nt3.41□□□□□ -1.86
RPN11P43588 FUN30YAL019W 3396 nt3.41□□□□□ -1.86
RPN11P43588 YPL150WYPL150W 2706 nt3.41□□□□□ -1.86
RPN11P43588 SEG1YMR086W 2883 nt3.41□□□□□ -1.86
RPN11P43588 PHM6YDR281C 315 nt3.41□□□□□ -1.86
RPN11P43588 RSM28YDR494W 1086 nt3.41□□□□□ -1.86
RPN11P43588 YFH7YFR007W 1062 nt3.41□□□□□ -1.86
RPN11P43588 YHR032W-AYHR032W-A 180 nt3.41□□□□□ -1.86
RPN11P43588 YHR050W-AYHR050W-A 171 nt3.41□□□□□ -1.86
RPN11P43588 IDP2YLR174W 1239 nt3.41□□□□□ -1.86
RPN11P43588 BUR2YLR226W 1188 nt3.41□□□□□ -1.86
RPN11P43588 YLR255CYLR255C 354 nt3.41□□□□□ -1.86
RPN11P43588 KTI11YBL071W-A 249 nt3.41□□□□□ -1.86
RPN11P43588 IZH2YOL002C 954 nt3.41□□□□□ -1.86
RPN11P43588 TSR4YOL022C 1227 nt3.41□□□□□ -1.86
RPN11P43588 SRL1YOR247W 633 nt3.41□□□□□ -1.86
RPN11P43588 YRO2YBR054W 1035 nt3.41□□□□□ -1.86
RPN11P43588 YPR172WYPR172W 603 nt3.41□□□□□ -1.86
RPN11P43588 APD1YBR151W 951 nt3.41□□□□□ -1.86
RPN11P43588 YCL023CYCL023C 348 nt3.41□□□□□ -1.86
RPN11P43588 FKS3YMR306W 5358 nt3.41□□□□□ -1.86
RPN11P43588 SLM2YNL047C 1971 nt3.41□□□□□ -1.86
RPN11P43588 ALG8YOR067C 1734 nt3.41□□□□□ -1.86
RPN11P43588 REB1YBR049C 2433 nt3.41□□□□□ -1.86
RPN11P43588 GCN1YGL195W 8019 nt3.41□□□□□ -1.86
RPN11P43588 CAF120YNL278W 3183 nt3.41□□□□□ -1.86
RPN11P43588 YLR001CYLR001C 2589 nt3.4□□□□□ -1.86
RPN11P43588 YDL163WYDL163W 303 nt3.4□□□□□ -1.87
RPN11P43588 SLU7YDR088C 1149 nt3.4□□□□□ -1.87
RPN11P43588 HTA1YDR225W 399 nt3.4□□□□□ -1.87
RPN11P43588 AYR1YIL124W 894 nt3.4□□□□□ -1.87
RPN11P43588 PAU14YIL176C 363 nt3.4□□□□□ -1.87
RPN11P43588 YIR014WYIR014W 729 nt3.4□□□□□ -1.87
RPN11P43588 PAU1YJL223C 363 nt3.4□□□□□ -1.87
RPN11P43588 YKR051WYKR051W 1257 nt3.4□□□□□ -1.87
RPN11P43588 GMC2YLR445W 567 nt3.4□□□□□ -1.87
RPN11P43588 RLP7YNL002C 969 nt3.4□□□□□ -1.87
RPN11P43588 TCB2YNL087W 3537 nt3.4□□□□□ -1.87
RPN11P43588 CWH41YGL027C 2502 nt3.4□□□□□ -1.87
RPN11P43588 SSY1YDR160W 2559 nt3.4□□□□□ -1.87
RPN11P43588 SYT1YPR095C 3681 nt3.39□□□□□ -1.87
RPN11P43588 IRC3YDR332W 2070 nt3.39□□□□□ -1.87
RPN11P43588 CHA4YLR098C 1947 nt3.39□□□□□ -1.87
RPN11P43588 BEM4YPL161C 1902 nt3.39□□□□□ -1.87
RPN11P43588 FRQ1YDR373W 573 nt3.39□□□□□ -1.87
RPN11P43588 SAE2YGL175C 1038 nt3.39□□□□□ -1.87
RPN11P43588 YGR109W-AYGR109W-A 873 nt3.39□□□□□ -1.87
RPN11P43588 YIL082WYIL082W 873 nt3.39□□□□□ -1.87
RPN11P43588 YKE2YLR200W 345 nt3.39□□□□□ -1.87
RPN11P43588 ECI1YLR284C 843 nt3.39□□□□□ -1.87
RPN11P43588 MPP6YNR024W 561 nt3.39□□□□□ -1.87
RPN11P43588 YOL029CYOL029C 606 nt3.39□□□□□ -1.87
RPN11P43588 RPL33AYPL143W 324 nt3.39□□□□□ -1.87
RPN11P43588 YBR071WYBR071W 636 nt3.39□□□□□ -1.87
RPN11P43588 RPC40YPR110C 1008 nt3.39□□□□□ -1.87
RPN11P43588 CMD1YBR109C 444 nt3.39□□□□□ -1.87
RPN11P43588 snR35snR35 204 nt3.39□□□□□ -1.87
RPN11P43588 SMI1YGR229C 1518 nt3.39□□□□□ -1.87
RPN11P43588 YJL132WYJL132W 2253 nt3.39□□□□□ -1.87
RPN11P43588 MFB1YDR219C 1398 nt3.38□□□□□ -1.87
RPN11P43588 SGS1YMR190C 4344 nt3.38□□□□□ -1.87
RPN11P43588 AYT1YLL063C 1425 nt3.38□□□□□ -1.87
RPN11P43588 YDR018CYDR018C 1191 nt3.38□□□□□ -1.87
RPN11P43588 OCA6YDR067C 675 nt3.38□□□□□ -1.87
RPN11P43588 YEL075CYEL075C 369 nt3.38□□□□□ -1.87
RPN11P43588 YER046W-AYER046W-A 330 nt3.38□□□□□ -1.87
RPN11P43588 YJR087WYJR087W 351 nt3.38□□□□□ -1.87
RPN11P43588 YLR456WYLR456W 615 nt3.38□□□□□ -1.87
RPN11P43588 YPL119C-AYPL119C-A 264 nt3.38□□□□□ -1.87
RPN11P43588 snR17asnR17a 333 nt3.38□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 46.7 ms