Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 ARP5YNL059C 2268 nt3.69□□□□□ -1.82
SSM4P40318 CST9YLR394W 1449 nt3.69□□□□□ -1.82
SSM4P40318 RAD18YCR066W 1464 nt3.69□□□□□ -1.82
SSM4P40318 APM3YBR288C 1452 nt3.69□□□□□ -1.82
SSM4P40318 YMR018WYMR018W 1545 nt3.69□□□□□ -1.82
SSM4P40318 YFH7YFR007W 1062 nt3.69□□□□□ -1.82
SSM4P40318 YGR039WYGR039W 312 nt3.69□□□□□ -1.82
SSM4P40318 TPT1YOL102C 693 nt3.69□□□□□ -1.82
SSM4P40318 YOR387CYOR387C 621 nt3.69□□□□□ -1.82
SSM4P40318 RXT2YBR095C 1293 nt3.69□□□□□ -1.82
SSM4P40318 YDR170W-AYDR170W-A 1323 nt3.69□□□□□ -1.82
SSM4P40318 YBL005W-AYBL005W-A 1323 nt3.69□□□□□ -1.82
SSM4P40318 YMR046CYMR046C 1323 nt3.69□□□□□ -1.82
SSM4P40318 AEP1YMR064W 1557 nt3.68□□□□□ -1.82
SSM4P40318 PWP2YCR057C 2772 nt3.68□□□□□ -1.82
SSM4P40318 CIN1YOR349W 3045 nt3.68□□□□□ -1.82
SSM4P40318 NEW1YPL226W 3591 nt3.68□□□□□ -1.82
SSM4P40318 DIG2YDR480W 972 nt3.68□□□□□ -1.82
SSM4P40318 YFL015CYFL015C 495 nt3.68□□□□□ -1.82
SSM4P40318 PNC1YGL037C 651 nt3.68□□□□□ -1.82
SSM4P40318 YGR073CYGR073C 372 nt3.68□□□□□ -1.82
SSM4P40318 AIM25YJR100C 984 nt3.68□□□□□ -1.82
SSM4P40318 YKL115CYKL115C 393 nt3.68□□□□□ -1.82
SSM4P40318 YOL114CYOL114C 609 nt3.68□□□□□ -1.82
SSM4P40318 YPR053CYPR053C 456 nt3.68□□□□□ -1.82
SSM4P40318 YPR077CYPR077C 372 nt3.68□□□□□ -1.82
SSM4P40318 TAZ1YPR140W 1146 nt3.68□□□□□ -1.82
SSM4P40318 YBR085C-AYBR085C-A 258 nt3.68□□□□□ -1.82
SSM4P40318 POP7YBR167C 423 nt3.68□□□□□ -1.82
SSM4P40318 PDR3YBL005W 2931 nt3.67□□□□□ -1.82
SSM4P40318 FAS1YKL182W 6156 nt3.67□□□□□ -1.82
SSM4P40318 SKN7YHR206W 1869 nt3.67□□□□□ -1.82
SSM4P40318 MDM36YPR083W 1740 nt3.67□□□□□ -1.82
SSM4P40318 ZDS2YML109W 2829 nt3.67□□□□□ -1.82
SSM4P40318 SMC6YLR383W 3345 nt3.67□□□□□ -1.82
SSM4P40318 THO1YER063W 657 nt3.67□□□□□ -1.82
SSM4P40318 GOS1YHL031C 672 nt3.67□□□□□ -1.82
SSM4P40318 YIL156W-BYIL156W-B 222 nt3.67□□□□□ -1.82
SSM4P40318 PAU23YLR037C 375 nt3.67□□□□□ -1.82
SSM4P40318 NBP1YLR457C 960 nt3.67□□□□□ -1.82
SSM4P40318 LTP1YPR073C 486 nt3.67□□□□□ -1.82
SSM4P40318 YGR237CYGR237C 2358 nt3.66□□□□□ -1.82
SSM4P40318 SRP68YPL243W 1800 nt3.66□□□□□ -1.82
SSM4P40318 YHL044WYHL044W 708 nt3.66□□□□□ -1.82
SSM4P40318 VMA5YKL080W 1179 nt3.66□□□□□ -1.82
SSM4P40318 YNL050CYNL050C 813 nt3.66□□□□□ -1.82
SSM4P40318 YOR050CYOR050C 348 nt3.66□□□□□ -1.82
SSM4P40318 RPL36BYPL249C-A 303 nt3.66□□□□□ -1.82
SSM4P40318 RPA190YOR341W 4995 nt3.65□□□□□ -1.82
SSM4P40318 YNL284C-AYNL284C-A 1323 nt3.65□□□□□ -1.83
SSM4P40318 YGL109WYGL109W 324 nt3.65□□□□□ -1.83
SSM4P40318 TAD1YGL243W 1203 nt3.65□□□□□ -1.83
SSM4P40318 YGR115CYGR115C 780 nt3.65□□□□□ -1.83
SSM4P40318 YKL066WYKL066W 444 nt3.65□□□□□ -1.83
SSM4P40318 EMC6YLL014W 327 nt3.65□□□□□ -1.83
SSM4P40318 INO4YOL108C 456 nt3.65□□□□□ -1.83
SSM4P40318 CDC37YDR168W 1521 nt3.64□□□□□ -1.83
SSM4P40318 POL4YCR014C 1749 nt3.64□□□□□ -1.83
SSM4P40318 PEX1YKL197C 3132 nt3.64□□□□□ -1.83
SSM4P40318 YNL011CYNL011C 1335 nt3.64□□□□□ -1.83
SSM4P40318 UBC13YDR092W 462 nt3.64□□□□□ -1.83
SSM4P40318 YDR381C-AYDR381C-A 345 nt3.64□□□□□ -1.83
SSM4P40318 RMD6YEL072W 696 nt3.64□□□□□ -1.83
SSM4P40318 YER039C-AYER039C-A 219 nt3.64□□□□□ -1.83
SSM4P40318 SMX2YFL017W-A 234 nt3.64□□□□□ -1.83
SSM4P40318 YPT52YKR014C 705 nt3.64□□□□□ -1.83
SSM4P40318 ATG10YLL042C 504 nt3.64□□□□□ -1.83
SSM4P40318 HHF2YNL030W 312 nt3.64□□□□□ -1.83
SSM4P40318 YNL184CYNL184C 327 nt3.64□□□□□ -1.83
SSM4P40318 RRG7YOR305W 729 nt3.64□□□□□ -1.83
SSM4P40318 SET1YHR119W 3243 nt3.64□□□□□ -1.83
SSM4P40318 XRN1YGL173C 4587 nt3.64□□□□□ -1.83
SSM4P40318 NOP56YLR197W 1515 nt3.64□□□□□ -1.83
SSM4P40318 YDR186CYDR186C 2634 nt3.64□□□□□ -1.83
SSM4P40318 ETP1YHL010C 1758 nt3.64□□□□□ -1.83
SSM4P40318 YDR203WYDR203W 318 nt3.63□□□□□ -1.83
SSM4P40318 YER158W-AYER158W-A 216 nt3.63□□□□□ -1.83
SSM4P40318 LIF1YGL090W 1266 nt3.63□□□□□ -1.83
SSM4P40318 RSM19YNR037C 276 nt3.63□□□□□ -1.83
SSM4P40318 BRX1YOL077C 876 nt3.63□□□□□ -1.83
SSM4P40318 RRD2YPL152W 1077 nt3.63□□□□□ -1.83
SSM4P40318 CDH1YGL003C 1701 nt3.63□□□□□ -1.83
SSM4P40318 SRO77YBL106C 3033 nt3.62□□□□□ -1.83
SSM4P40318 STD1YOR047C 1335 nt3.62□□□□□ -1.83
SSM4P40318 VBA4YDR119W 2307 nt3.62□□□□□ -1.83
SSM4P40318 TPO5YKL174C 1857 nt3.62□□□□□ -1.83
SSM4P40318 YLR108CYLR108C 1458 nt3.62□□□□□ -1.83
SSM4P40318 YIL054WYIL054W 318 nt3.62□□□□□ -1.83
SSM4P40318 RPL13BYMR142C 600 nt3.62□□□□□ -1.83
SSM4P40318 RCE1YMR274C 948 nt3.62□□□□□ -1.83
SSM4P40318 RPS7AYOR096W 573 nt3.62□□□□□ -1.83
SSM4P40318 VPS41YDR080W 2979 nt3.62□□□□□ -1.83
SSM4P40318 AIM11YER093C-A 414 nt3.61□□□□□ -1.83
SSM4P40318 RPB9YGL070C 369 nt3.61□□□□□ -1.83
SSM4P40318 RPS23AYGR118W 438 nt3.61□□□□□ -1.83
SSM4P40318 CAP1YKL007W 807 nt3.61□□□□□ -1.83
SSM4P40318 YNL303WYNL303W 348 nt3.61□□□□□ -1.83
SSM4P40318 RPS23BYPR132W 438 nt3.61□□□□□ -1.83
SSM4P40318 snR35snR35 204 nt3.61□□□□□ -1.83
SSM4P40318 DOA4YDR069C 2781 nt3.61□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 175.2 ms