Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 YJL032WYJL032W 315 nt2.42□□□□□ -2.02
RPB9P27999 YKR011CYKR011C 1062 nt2.42□□□□□ -2.02
RPB9P27999 FAR3YMR052W 615 nt2.42□□□□□ -2.02
RPB9P27999 END3YNL084C 1050 nt2.42□□□□□ -2.02
RPB9P27999 YNL276CYNL276C 396 nt2.42□□□□□ -2.02
RPB9P27999 TUM1YOR251C 915 nt2.42□□□□□ -2.02
RPB9P27999 ORC1YML065W 2745 nt2.41□□□□□ -2.02
RPB9P27999 VAC14YLR386W 2643 nt2.41□□□□□ -2.02
RPB9P27999 RCY1YJL204C 2523 nt2.41□□□□□ -2.02
RPB9P27999 NRG1YDR043C 696 nt2.41□□□□□ -2.02
RPB9P27999 DIG2YDR480W 972 nt2.41□□□□□ -2.02
RPB9P27999 ATG10YLL042C 504 nt2.41□□□□□ -2.02
RPB9P27999 YLR154C-HYLR154C-H 132 nt2.41□□□□□ -2.02
RPB9P27999 YLR156C-AYLR156C-A 132 nt2.41□□□□□ -2.02
RPB9P27999 YLR157C-CYLR157C-C 132 nt2.41□□□□□ -2.02
RPB9P27999 YLR159C-AYLR159C-A 132 nt2.41□□□□□ -2.02
RPB9P27999 RPL6BYLR448W 531 nt2.41□□□□□ -2.02
RPB9P27999 HHF2YNL030W 312 nt2.41□□□□□ -2.02
RPB9P27999 RSM19YNR037C 276 nt2.41□□□□□ -2.02
RPB9P27999 LTP1YPR073C 486 nt2.41□□□□□ -2.02
RPB9P27999 RRM3YHR031C 2172 nt2.41□□□□□ -2.02
RPB9P27999 BUB1YGR188C 3066 nt2.41□□□□□ -2.02
RPB9P27999 STP2YHR006W 1626 nt2.41□□□□□ -2.02
RPB9P27999 TIF4631YGR162W 2859 nt2.41□□□□□ -2.02
RPB9P27999 TRM82YDR165W 1335 nt2.41□□□□□ -2.02
RPB9P27999 TLC1TLC1 1301 nt2.41□□□□□ -2.02
RPB9P27999 YNL011CYNL011C 1335 nt2.41□□□□□ -2.02
RPB9P27999 ESA1YOR244W 1338 nt2.41□□□□□ -2.02
RPB9P27999 YDR034C-DYDR034C-D 5313 nt2.4□□□□□ -2.02
RPB9P27999 POL4YCR014C 1749 nt2.4□□□□□ -2.02
RPB9P27999 AVT5YBL089W 1380 nt2.4□□□□□ -2.02
RPB9P27999 MNT3YIL014W 1893 nt2.4□□□□□ -2.03
RPB9P27999 LCB4YOR171C 1875 nt2.4□□□□□ -2.03
RPB9P27999 YDR098C-BYDR098C-B 5268 nt2.4□□□□□ -2.03
RPB9P27999 YDR210C-DYDR210C-D 5268 nt2.4□□□□□ -2.03
RPB9P27999 YDR316W-BYDR316W-B 5268 nt2.4□□□□□ -2.03
RPB9P27999 YDR365W-BYDR365W-B 5268 nt2.4□□□□□ -2.03
RPB9P27999 YER138CYER138C 5268 nt2.4□□□□□ -2.03
RPB9P27999 YER160CYER160C 5268 nt2.4□□□□□ -2.03
RPB9P27999 YGR038C-BYGR038C-B 5268 nt2.4□□□□□ -2.03
RPB9P27999 YGR161C-DYGR161C-D 5268 nt2.4□□□□□ -2.03
RPB9P27999 YJR027WYJR027W 5268 nt2.4□□□□□ -2.03
RPB9P27999 YLR157C-BYLR157C-B 5268 nt2.4□□□□□ -2.03
RPB9P27999 YML039WYML039W 5268 nt2.4□□□□□ -2.03
RPB9P27999 YML045WYML045W 5268 nt2.4□□□□□ -2.03
RPB9P27999 YMR050CYMR050C 5268 nt2.4□□□□□ -2.03
RPB9P27999 YOL103W-BYOL103W-B 5268 nt2.4□□□□□ -2.03
RPB9P27999 YBR012W-BYBR012W-B 5271 nt2.4□□□□□ -2.03
RPB9P27999 YOR142W-BYOR142W-B 5268 nt2.4□□□□□ -2.03
RPB9P27999 YPL257W-BYPL257W-B 5268 nt2.4□□□□□ -2.03
RPB9P27999 YPR158W-BYPR158W-B 5271 nt2.4□□□□□ -2.03
RPB9P27999 snR70snR70 164 nt2.4□□□□□ -2.03
RPB9P27999 RTT105YER104W 627 nt2.4□□□□□ -2.03
RPB9P27999 GTR2YGR163W 1026 nt2.4□□□□□ -2.03
RPB9P27999 tQ(UUG)BtQ(UUG)B 72 nt2.4□□□□□ -2.03
RPB9P27999 VMA10YHR039C-A 345 nt2.4□□□□□ -2.03
RPB9P27999 SDP1YIL113W 630 nt2.4□□□□□ -2.03
RPB9P27999 RPS21BYJL136C 264 nt2.4□□□□□ -2.03
RPB9P27999 YAL031W-AYAL031W-A 309 nt2.4□□□□□ -2.03
RPB9P27999 YKL091CYKL091C 933 nt2.4□□□□□ -2.03
RPB9P27999 YMR141CYMR141C 309 nt2.4□□□□□ -2.03
RPB9P27999 RHO5YNL180C 996 nt2.4□□□□□ -2.03
RPB9P27999 GCY1YOR120W 939 nt2.4□□□□□ -2.03
RPB9P27999 PFY1YOR122C 381 nt2.4□□□□□ -2.03
RPB9P27999 CIN2YPL241C 807 nt2.4□□□□□ -2.03
RPB9P27999 CMD1YBR109C 444 nt2.4□□□□□ -2.03
RPB9P27999 snR35snR35 204 nt2.4□□□□□ -2.03
RPB9P27999 CWH41YGL027C 2502 nt2.4□□□□□ -2.03
RPB9P27999 EMP70YLR083C 2004 nt2.39□□□□□ -2.03
RPB9P27999 FRE8YLR047C 2061 nt2.39□□□□□ -2.03
RPB9P27999 YDR442WYDR442W 393 nt2.39□□□□□ -2.03
RPB9P27999 GOS1YHL031C 672 nt2.39□□□□□ -2.03
RPB9P27999 YIL141WYIL141W 390 nt2.39□□□□□ -2.03
RPB9P27999 AIM25YJR100C 984 nt2.39□□□□□ -2.03
RPB9P27999 MER1YNL210W 813 nt2.39□□□□□ -2.03
RPB9P27999 MSN1YOL116W 1149 nt2.39□□□□□ -2.03
RPB9P27999 GRX5YPL059W 453 nt2.39□□□□□ -2.03
RPB9P27999 ARL1YBR164C 552 nt2.39□□□□□ -2.03
RPB9P27999 HFM1YGL251C 3564 nt2.39□□□□□ -2.03
RPB9P27999 UBP8YMR223W 1416 nt2.39□□□□□ -2.03
RPB9P27999 PCI8YIL071C 1335 nt2.39□□□□□ -2.03
RPB9P27999 RTT109YLL002W 1311 nt2.39□□□□□ -2.03
RPB9P27999 FAR1YJL157C 2493 nt2.39□□□□□ -2.03
RPB9P27999 MSH4YFL003C 2637 nt2.38□□□□□ -2.03
RPB9P27999 21S_rRNA21S_rRNA 3296 nt2.38□□□□□ -2.03
RPB9P27999 TFC1YBR123C 1950 nt2.38□□□□□ -2.03
RPB9P27999 MIX14YDR031W 366 nt2.38□□□□□ -2.03
RPB9P27999 CDH1YGL003C 1701 nt2.38□□□□□ -2.03
RPB9P27999 YHL005CYHL005C 393 nt2.38□□□□□ -2.03
RPB9P27999 SPO11YHL022C 1197 nt2.38□□□□□ -2.03
RPB9P27999 DAL2YIR029W 1032 nt2.38□□□□□ -2.03
RPB9P27999 YKL115CYKL115C 393 nt2.38□□□□□ -2.03
RPB9P27999 RPC37YKR025W 849 nt2.38□□□□□ -2.03
RPB9P27999 YLL037WYLL037W 381 nt2.38□□□□□ -2.03
RPB9P27999 RPL6AYML073C 531 nt2.38□□□□□ -2.03
RPB9P27999 YBL029C-AYBL029C-A 285 nt2.38□□□□□ -2.03
RPB9P27999 VPS33YLR396C 2076 nt2.38□□□□□ -2.03
RPB9P27999 PEX5YDR244W 1839 nt2.38□□□□□ -2.03
RPB9P27999 SMC3YJL074C 3693 nt2.37□□□□□ -2.03
RPB9P27999 VPS3YDR495C 3036 nt2.37□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 46.5 ms