Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 KPNA2-207ENST00000584026 561 ntTSL 47.26□□□□□ -1.256e-7■■■■□ 21
DDX42Q86XP3 KPNA2-205ENST00000583269 611 ntTSL 45.4□□□□□ -1.546e-7■■■■□ 21
DDX42Q86XP3 SRRM2-222ENST00000575009 1146 ntTSL 527.52■■■□□ 24e-17■■■■□ 20.9
DDX42Q86XP3 SRRM2-229ENST00000576894 2210 ntTSL 1 (best)22.36■■□□□ 1.174e-17■■■■□ 20.9
DDX42Q86XP3 SRRM2-230ENST00000576924 3314 ntTSL 1 (best)18.49■□□□□ 0.554e-17■■■■□ 20.9
DDX42Q86XP3 SRRM2-225ENST00000576076 914 nt17.62■□□□□ 0.414e-17■■■■□ 20.9
DDX42Q86XP3 SRRM2-208ENST00000571378 2870 ntTSL 1 (best)15.78■□□□□ 0.124e-17■■■■□ 20.9
DDX42Q86XP3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.7□□□□□ -0.064e-17■■■■□ 20.9
DDX42Q86XP3 SRRM2-212ENST00000572952 1118 ntTSL 213.99□□□□□ -0.174e-17■■■■□ 20.9
DDX42Q86XP3 SRRM2-209ENST00000572278 711 ntTSL 210.27□□□□□ -0.774e-17■■■■□ 20.9
DDX42Q86XP3 SRRM2-215ENST00000573498 994 ntTSL 36.13□□□□□ -1.434e-17■■■■□ 20.9
DDX42Q86XP3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.764e-8■■■■□ 20.7
DDX42Q86XP3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.764e-8■■■■□ 20.7
DDX42Q86XP3 DDAH2-220ENST00000488119 1121 ntTSL 223.56■■□□□ 1.364e-8■■■■□ 20.7
DDX42Q86XP3 YIPF2-206ENST00000588347 753 ntTSL 223.55■■□□□ 1.364e-8■■■■□ 20.7
DDX42Q86XP3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.34e-8■■■■□ 20.7
DDX42Q86XP3 NDUFV2-208ENST00000577703 854 ntTSL 323.19■■□□□ 1.34e-8■■■■□ 20.7
DDX42Q86XP3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.074e-8■■■■□ 20.7
DDX42Q86XP3 YIPF2-208ENST00000589971 879 ntTSL 221.7■■□□□ 1.064e-8■■■■□ 20.7
DDX42Q86XP3 YIPF2-203ENST00000586575 932 ntTSL 521.21■□□□□ 0.994e-8■■■■□ 20.7
DDX42Q86XP3 DDAH2-214ENST00000416410 887 ntTSL 220.5■□□□□ 0.874e-8■■■■□ 20.7
DDX42Q86XP3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.37■□□□□ 0.853e-6■■■■□ 20.7
DDX42Q86XP3 DDAH2-218ENST00000480913 937 ntTSL 520.08■□□□□ 0.814e-8■■■■□ 20.7
DDX42Q86XP3 DDAH2-217ENST00000469963 1682 ntTSL 520.03■□□□□ 0.84e-8■■■■□ 20.7
DDX42Q86XP3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.784e-8■■■■□ 20.7
DDX42Q86XP3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.64■□□□□ 0.734e-8■■■■□ 20.7
DDX42Q86XP3 DDAH2-215ENST00000436437 882 ntTSL 319.55■□□□□ 0.724e-8■■■■□ 20.7
DDX42Q86XP3 YIPF2-207ENST00000588962 788 ntTSL 218.97■□□□□ 0.634e-8■■■■□ 20.7
DDX42Q86XP3 YIPF2-202ENST00000585858 656 ntTSL 318.97■□□□□ 0.634e-8■■■■□ 20.7
DDX42Q86XP3 YIPF2-212ENST00000592646 950 ntTSL 318.97■□□□□ 0.634e-8■■■■□ 20.7
DDX42Q86XP3 YIPF2-205ENST00000587943 796 ntTSL 518.72■□□□□ 0.594e-8■■■■□ 20.7
DDX42Q86XP3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.38■□□□□ 0.533e-6■■■■□ 20.7
DDX42Q86XP3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.523e-6■■■■□ 20.7
DDX42Q86XP3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.484e-8■■■■□ 20.7
DDX42Q86XP3 NDUFV2-209ENST00000583375 211 ntTSL 517.26■□□□□ 0.354e-8■■■■□ 20.7
DDX42Q86XP3 ZSWIM8-205ENST00000433366 5773 ntTSL 517.25■□□□□ 0.353e-6■■■■□ 20.7
DDX42Q86XP3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.86■□□□□ 0.293e-6■■■■□ 20.7
DDX42Q86XP3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.123e-6■■■■□ 20.7
DDX42Q86XP3 ZSWIM8-212ENST00000492395 4490 ntTSL 1 (best)13.2□□□□□ -0.33e-6■■■■□ 20.7
DDX42Q86XP3 DDAH2-219ENST00000483792 898 ntTSL 512.82□□□□□ -0.364e-8■■■■□ 20.7
DDX42Q86XP3 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.82□□□□□ -1.164e-8■■■■□ 20.7
DDX42Q86XP3 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)20.92■□□□□ 0.946e-7■■■■□ 20.7
DDX42Q86XP3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.356e-7■■■■□ 20.7
DDX42Q86XP3 MAN2A2-202ENST00000557865 2671 ntTSL 214.73□□□□□ -0.056e-7■■■■□ 20.7
DDX42Q86XP3 MAN2A2-204ENST00000558161 4918 ntTSL 1 (best)12.87□□□□□ -0.356e-7■■■■□ 20.7
DDX42Q86XP3 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.516e-7■■■■□ 20.7
DDX42Q86XP3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.32■■□□□ 1.162e-6■■■■□ 20.6
DDX42Q86XP3 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)16.61■□□□□ 0.252e-6■■■■□ 20.6
DDX42Q86XP3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.342e-7■■■■□ 20.6
DDX42Q86XP3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.192e-7■■■■□ 20.6
DDX42Q86XP3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.12e-7■■■■□ 20.6
DDX42Q86XP3 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.311e-8■■■■□ 20.6
DDX42Q86XP3 BRD2-204ENST00000449025 3210 ntAPPRIS ALT2 TSL 1 (best)13.09□□□□□ -0.311e-8■■■■□ 20.6
DDX42Q86XP3 CBX4-203ENST00000494546 432 ntTSL 335.08■■■■□ 3.211e-6■■■■□ 20.6
DDX42Q86XP3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.431e-6■■■■□ 20.6
DDX42Q86XP3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.99■■■□□ 2.391e-6■■■■□ 20.6
DDX42Q86XP3 MARS-206ENST00000546971 711 ntTSL 217.52■□□□□ 0.47e-7■■■■□ 20.2
DDX42Q86XP3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.61■□□□□ 0.257e-7■■■■□ 20.2
DDX42Q86XP3 MARS-216ENST00000549048 755 ntTSL 316.54■□□□□ 0.247e-7■■■■□ 20.2
DDX42Q86XP3 MARS-204ENST00000545888 2979 ntTSL 516.26■□□□□ 0.197e-7■■■■□ 20.2
DDX42Q86XP3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.097e-7■■■■□ 20.2
DDX42Q86XP3 MARS-215ENST00000548944 294 ntTSL 314.92□□□□□ -0.027e-7■■■■□ 20.2
DDX42Q86XP3 MARS-203ENST00000537638 3592 ntTSL 214.79□□□□□ -0.047e-7■■■■□ 20.2
DDX42Q86XP3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.92■□□□□ 0.625e-7■■■■□ 19.9
DDX42Q86XP3 VEGFA-221ENST00000520265 336 ntTSL 514.95□□□□□ -0.025e-7■■■■□ 19.9
DDX42Q86XP3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.35□□□□□ -0.115e-7■■■■□ 19.9
DDX42Q86XP3 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.96□□□□□ -0.175e-7■■■■□ 19.9
DDX42Q86XP3 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC13.41□□□□□ -0.265e-7■■■■□ 19.9
DDX42Q86XP3 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.295e-7■■■■□ 19.9
DDX42Q86XP3 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.325e-7■■■■□ 19.9
DDX42Q86XP3 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC13.08□□□□□ -0.325e-7■■■■□ 19.9
DDX42Q86XP3 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC13.08□□□□□ -0.325e-7■■■■□ 19.9
DDX42Q86XP3 BCL6-210ENST00000496823 1138 ntTSL 314.51□□□□□ -0.092e-6■■■■□ 19.9
DDX42Q86XP3 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC12.83□□□□□ -0.362e-6■■■■□ 19.9
DDX42Q86XP3 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.552e-6■■■■□ 19.9
DDX42Q86XP3 BCL6-209ENST00000480458 342 ntTSL 58.69□□□□□ -1.022e-6■■■■□ 19.9
DDX42Q86XP3 BCL6-207ENST00000470319 526 ntTSL 43.84□□□□□ -1.792e-6■■■■□ 19.9
DDX42Q86XP3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.39■■□□□ 1.813e-6■■■■□ 19.6
DDX42Q86XP3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.18■■□□□ 1.621e-7■■■■□ 19.6
DDX42Q86XP3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.563e-6■■■■□ 19.6
DDX42Q86XP3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.493e-6■■■■□ 19.6
DDX42Q86XP3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.35■■□□□ 1.491e-7■■■■□ 19.6
DDX42Q86XP3 DAZAP1-204ENST00000586579 619 ntTSL 323.87■■□□□ 1.413e-6■■■■□ 19.6
DDX42Q86XP3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.343e-6■■■■□ 19.6
DDX42Q86XP3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.011e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-212ENST00000583564 377 ntTSL 321.24■□□□□ 0.991e-7■■■■□ 19.6
DDX42Q86XP3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.911e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.23■□□□□ 0.831e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-209ENST00000579698 572 ntTSL 419.86■□□□□ 0.771e-7■■■■□ 19.6
DDX42Q86XP3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.61e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.52■□□□□ 0.561e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-214ENST00000585215 767 ntTSL 417.89■□□□□ 0.451e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-206ENST00000577624 510 ntTSL 317.74■□□□□ 0.431e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.74■□□□□ 0.431e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-210ENST00000581271 528 ntTSL 417.69■□□□□ 0.421e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.411e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-205ENST00000405481 841 ntTSL 215.91■□□□□ 0.141e-7■■■■□ 19.6
DDX42Q86XP3 DAZAP1-210ENST00000592453 1021 ntTSL 515.59■□□□□ 0.093e-6■■■■□ 19.6
DDX42Q86XP3 PYCR1-211ENST00000582198 868 ntTSL 514.7□□□□□ -0.061e-7■■■■□ 19.6
DDX42Q86XP3 PYCR1-215ENST00000585244 578 ntTSL 414.53□□□□□ -0.081e-7■■■■□ 19.6
Retrieved 100 of 2,477 protein–RNA pairs in 15.4 ms