Protein–RNA interactions for Protein: Q04214

TY1B-MR1, Transposon Ty1-MR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-MR1Q04214 QDR2YIL121W 1629 nt14.14□□□□□ -0.15
TY1B-MR1Q04214 PAR32YDL173W 888 nt14.13□□□□□ -0.15
TY1B-MR1Q04214 TUB4YLR212C 1422 nt14.13□□□□□ -0.15
TY1B-MR1Q04214 YGR259CYGR259C 441 nt14.12□□□□□ -0.15
TY1B-MR1Q04214 YIA6YIL006W 1122 nt14.11□□□□□ -0.15
TY1B-MR1Q04214 NUC1YJL208C 990 nt14.11□□□□□ -0.15
TY1B-MR1Q04214 YBL086CYBL086C 1401 nt14.11□□□□□ -0.15
TY1B-MR1Q04214 YKR005CYKR005C 1578 nt14.11□□□□□ -0.15
TY1B-MR1Q04214 GSF2YML048W 1212 nt14.11□□□□□ -0.15
TY1B-MR1Q04214 CDD1YLR245C 429 nt14.08□□□□□ -0.16
TY1B-MR1Q04214 YMR103CYMR103C 363 nt14.07□□□□□ -0.16
TY1B-MR1Q04214 BNI5YNL166C 1347 nt14.07□□□□□ -0.16
TY1B-MR1Q04214 MHF1YOL086W-A 273 nt14.06□□□□□ -0.16
TY1B-MR1Q04214 SSN3YPL042C 1668 nt14.05□□□□□ -0.16
TY1B-MR1Q04214 IRC24YIR036C 792 nt14.05□□□□□ -0.16
TY1B-MR1Q04214 SAM35YHR083W 990 nt14.04□□□□□ -0.16
TY1B-MR1Q04214 YPR126CYPR126C 309 nt14.02□□□□□ -0.16
TY1B-MR1Q04214 TOA2YKL058W 369 nt14□□□□□ -0.17
TY1B-MR1Q04214 KRE1YNL322C 942 nt14□□□□□ -0.17
TY1B-MR1Q04214 GND2YGR256W 1479 nt14□□□□□ -0.17
TY1B-MR1Q04214 YCP4YCR004C 744 nt13.99□□□□□ -0.17
TY1B-MR1Q04214 CTI6YPL181W 1521 nt13.98□□□□□ -0.17
TY1B-MR1Q04214 RIB7YBR153W 735 nt13.97□□□□□ -0.17
TY1B-MR1Q04214 YCR025CYCR025C 411 nt13.96□□□□□ -0.17
TY1B-MR1Q04214 POT1YIL160C 1254 nt13.94□□□□□ -0.18
TY1B-MR1Q04214 PHO23YNL097C 993 nt13.94□□□□□ -0.18
TY1B-MR1Q04214 ACO2YJL200C 2370 nt13.92□□□□□ -0.18
TY1B-MR1Q04214 RPT5YOR117W 1305 nt13.92□□□□□ -0.18
TY1B-MR1Q04214 DBP1YPL119C 1854 nt13.92□□□□□ -0.18
TY1B-MR1Q04214 HXT1YHR094C 1713 nt13.9□□□□□ -0.18
TY1B-MR1Q04214 TRT2tT(CGU)K 72 nt13.9□□□□□ -0.18
TY1B-MR1Q04214 TPS1YBR126C 1488 nt13.89□□□□□ -0.19
TY1B-MR1Q04214 BMT6YLR063W 1098 nt13.88□□□□□ -0.19
TY1B-MR1Q04214 BRR1YPR057W 1026 nt13.88□□□□□ -0.19
TY1B-MR1Q04214 NAS2YIL007C 663 nt13.86□□□□□ -0.19
TY1B-MR1Q04214 BUD20YLR074C 501 nt13.86□□□□□ -0.19
TY1B-MR1Q04214 LYS20YDL182W 1287 nt13.86□□□□□ -0.19
TY1B-MR1Q04214 SAM50YNL026W 1455 nt13.85□□□□□ -0.19
TY1B-MR1Q04214 DDI1YER143W 1287 nt13.85□□□□□ -0.19
TY1B-MR1Q04214 NIF3YGL221C 867 nt13.84□□□□□ -0.19
TY1B-MR1Q04214 OYE2YHR179W 1203 nt13.84□□□□□ -0.19
TY1B-MR1Q04214 DAK2YFL053W 1776 nt13.81□□□□□ -0.2
TY1B-MR1Q04214 HIF1YLL022C 1158 nt13.81□□□□□ -0.2
TY1B-MR1Q04214 SAM2YDR502C 1155 nt13.79□□□□□ -0.2
TY1B-MR1Q04214 IGD1YFR017C 588 nt13.79□□□□□ -0.2
TY1B-MR1Q04214 LEU9YOR108W 1815 nt13.79□□□□□ -0.2
TY1B-MR1Q04214 MSC1YML128C 1542 nt13.76□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)DtA(AGC)D 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)FtA(AGC)F 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)GtA(AGC)G 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)HtA(AGC)H 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)JtA(AGC)J 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)K1tA(AGC)K1 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)K2tA(AGC)K2 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)LtA(AGC)L 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)M1tA(AGC)M1 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)M2tA(AGC)M2 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 tA(AGC)PtA(AGC)P 73 nt13.75□□□□□ -0.21
TY1B-MR1Q04214 UFO1YML088W 2007 nt13.74□□□□□ -0.21
TY1B-MR1Q04214 SWM1YDR260C 513 nt13.7□□□□□ -0.22
TY1B-MR1Q04214 FUB1YCR076C 753 nt13.69□□□□□ -0.22
TY1B-MR1Q04214 RAS2YNL098C 969 nt13.68□□□□□ -0.22
TY1B-MR1Q04214 FLX1YIL134W 936 nt13.68□□□□□ -0.22
TY1B-MR1Q04214 OYE3YPL171C 1203 nt13.68□□□□□ -0.22
TY1B-MR1Q04214 SPE2YOL052C 1191 nt13.67□□□□□ -0.22
TY1B-MR1Q04214 IPL1YPL209C 1104 nt13.67□□□□□ -0.22
TY1B-MR1Q04214 EAF3YPR023C 1206 nt13.66□□□□□ -0.22
TY1B-MR1Q04214 SHY1YGR112W 1170 nt13.65□□□□□ -0.22
TY1B-MR1Q04214 FLR1YBR008C 1647 nt13.64□□□□□ -0.23
TY1B-MR1Q04214 SEC61YLR378C 1443 nt13.64□□□□□ -0.23
TY1B-MR1Q04214 TGA1tA(UGC)A 73 nt13.63□□□□□ -0.23
TY1B-MR1Q04214 tA(UGC)EtA(UGC)E 73 nt13.63□□□□□ -0.23
TY1B-MR1Q04214 tA(UGC)GtA(UGC)G 73 nt13.63□□□□□ -0.23
TY1B-MR1Q04214 tA(UGC)LtA(UGC)L 73 nt13.63□□□□□ -0.23
TY1B-MR1Q04214 tA(UGC)OtA(UGC)O 73 nt13.63□□□□□ -0.23
TY1B-MR1Q04214 TMA23YMR269W 636 nt13.63□□□□□ -0.23
TY1B-MR1Q04214 YNL024CYNL024C 741 nt13.63□□□□□ -0.23
TY1B-MR1Q04214 IML3YBR107C 738 nt13.63□□□□□ -0.23
TY1B-MR1Q04214 YER188WYER188W 720 nt13.62□□□□□ -0.23
TY1B-MR1Q04214 DPS1YLL018C 1674 nt13.61□□□□□ -0.23
TY1B-MR1Q04214 YFR036W-AYFR036W-A 651 nt13.61□□□□□ -0.23
TY1B-MR1Q04214 FCY1YPR062W 477 nt13.61□□□□□ -0.23
TY1B-MR1Q04214 SPS100YHR139C 981 nt13.6□□□□□ -0.23
TY1B-MR1Q04214 ADE8YDR408C 645 nt13.59□□□□□ -0.23
TY1B-MR1Q04214 LSM5YER146W 282 nt13.58□□□□□ -0.23
TY1B-MR1Q04214 PHB2YGR231C 933 nt13.58□□□□□ -0.23
TY1B-MR1Q04214 SNF1YDR477W 1902 nt13.57□□□□□ -0.24
TY1B-MR1Q04214 YMR007WYMR007W 381 nt13.56□□□□□ -0.24
TY1B-MR1Q04214 PRP4YPR178W 1398 nt13.55□□□□□ -0.24
TY1B-MR1Q04214 ADH3YMR083W 1128 nt13.55□□□□□ -0.24
TY1B-MR1Q04214 ABZ2YMR289W 1125 nt13.55□□□□□ -0.24
TY1B-MR1Q04214 GRH1YDR517W 1119 nt13.54□□□□□ -0.24
TY1B-MR1Q04214 KAE1YKR038C 1161 nt13.53□□□□□ -0.24
TY1B-MR1Q04214 RSC8YFR037C 1674 nt13.52□□□□□ -0.25
TY1B-MR1Q04214 PAU21YOR394W 495 nt13.5□□□□□ -0.25
TY1B-MR1Q04214 PAU22YPL282C 495 nt13.5□□□□□ -0.25
TY1B-MR1Q04214 YOR343CYOR343C 327 nt13.5□□□□□ -0.25
TY1B-MR1Q04214 THP3YPR045C 1413 nt13.5□□□□□ -0.25
TY1B-MR1Q04214 HOG1YLR113W 1308 nt13.49□□□□□ -0.25
TY1B-MR1Q04214 PCP1YGR101W 1041 nt13.48□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms