Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 CLB6YGR109C 1143 nt10.07□□□□□ -0.8
VPS60Q03390 YMR103CYMR103C 363 nt10.07□□□□□ -0.8
VPS60Q03390 YHR218WYHR218W 1812 nt10.07□□□□□ -0.8
VPS60Q03390 QDR2YIL121W 1629 nt10.07□□□□□ -0.8
VPS60Q03390 MEP3YPR138C 1470 nt10.06□□□□□ -0.8
VPS60Q03390 YDL086WYDL086W 822 nt10.06□□□□□ -0.8
VPS60Q03390 SAM2YDR502C 1155 nt10.06□□□□□ -0.8
VPS60Q03390 RPL4BYDR012W 1089 nt10.04□□□□□ -0.8
VPS60Q03390 RPL4AYBR031W 1089 nt10.04□□□□□ -0.8
VPS60Q03390 ODC1YPL134C 933 nt10.04□□□□□ -0.8
VPS60Q03390 YPS3YLR121C 1527 nt10.03□□□□□ -0.8
VPS60Q03390 THI74YDR438W 1113 nt10.02□□□□□ -0.81
VPS60Q03390 SBA1YKL117W 651 nt10.02□□□□□ -0.81
VPS60Q03390 FLR1YBR008C 1647 nt10.02□□□□□ -0.81
VPS60Q03390 DIG1YPL049C 1359 nt10.01□□□□□ -0.81
VPS60Q03390 GID8YMR135C 1368 nt9.99□□□□□ -0.81
VPS60Q03390 SEC61YLR378C 1443 nt9.99□□□□□ -0.81
VPS60Q03390 DLD2YDL178W 1593 nt9.98□□□□□ -0.81
VPS60Q03390 OXA1YER154W 1209 nt9.97□□□□□ -0.81
VPS60Q03390 XYL2YLR070C 1071 nt9.97□□□□□ -0.81
VPS60Q03390 RPS14BYJL191W 417 nt9.96□□□□□ -0.82
VPS60Q03390 SSL2YIL143C 2532 nt9.94□□□□□ -0.82
VPS60Q03390 AIM45YPR004C 1035 nt9.93□□□□□ -0.82
VPS60Q03390 YKL133CYKL133C 1392 nt9.92□□□□□ -0.82
VPS60Q03390 MRS6YOR370C 1812 nt9.92□□□□□ -0.82
VPS60Q03390 YOR072WYOR072W 315 nt9.92□□□□□ -0.82
VPS60Q03390 PCP1YGR101W 1041 nt9.91□□□□□ -0.82
VPS60Q03390 HEM13YDR044W 987 nt9.9□□□□□ -0.82
VPS60Q03390 SSN3YPL042C 1668 nt9.9□□□□□ -0.83
VPS60Q03390 HXT10YFL011W 1641 nt9.89□□□□□ -0.83
VPS60Q03390 YDR094WYDR094W 336 nt9.89□□□□□ -0.83
VPS60Q03390 GID7YCL039W 2238 nt9.88□□□□□ -0.83
VPS60Q03390 YGL034CYGL034C 366 nt9.88□□□□□ -0.83
VPS60Q03390 MDM35YKL053C-A 261 nt9.88□□□□□ -0.83
VPS60Q03390 PAU16YKL224C 372 nt9.88□□□□□ -0.83
VPS60Q03390 YER188WYER188W 720 nt9.86□□□□□ -0.83
VPS60Q03390 MSF1YPR047W 1410 nt9.86□□□□□ -0.83
VPS60Q03390 YHR219WYHR219W 1875 nt9.85□□□□□ -0.83
VPS60Q03390 NAT4YMR069W 858 nt9.84□□□□□ -0.83
VPS60Q03390 THI72YOR192C 1800 nt9.84□□□□□ -0.83
VPS60Q03390 BNI5YNL166C 1347 nt9.83□□□□□ -0.84
VPS60Q03390 PHO23YNL097C 993 nt9.82□□□□□ -0.84
VPS60Q03390 TSC10YBR265W 963 nt9.82□□□□□ -0.84
VPS60Q03390 MSC1YML128C 1542 nt9.82□□□□□ -0.84
VPS60Q03390 OSH7YHR001W 1314 nt9.82□□□□□ -0.84
VPS60Q03390 FUB1YCR076C 753 nt9.81□□□□□ -0.84
VPS60Q03390 CWP2YKL096W-A 279 nt9.81□□□□□ -0.84
VPS60Q03390 YRF1-2YER190W 5046 nt9.8□□□□□ -0.84
VPS60Q03390 APT2YDR441C 546 nt9.8□□□□□ -0.84
VPS60Q03390 MEX67YPL169C 1800 nt9.79□□□□□ -0.84
VPS60Q03390 AIM1YAL046C 357 nt9.79□□□□□ -0.84
VPS60Q03390 YLR279WYLR279W 390 nt9.79□□□□□ -0.84
VPS60Q03390 YLR046CYLR046C 813 nt9.77□□□□□ -0.85
VPS60Q03390 TIM44YIL022W 1296 nt9.76□□□□□ -0.85
VPS60Q03390 DLD3YEL071W 1491 nt9.76□□□□□ -0.85
VPS60Q03390 NBA1YOL070C 1506 nt9.76□□□□□ -0.85
VPS60Q03390 ENT4YLL038C 744 nt9.75□□□□□ -0.85
VPS60Q03390 RPD3YNL330C 1302 nt9.75□□□□□ -0.85
VPS60Q03390 LSR1LSR1 1175 nt9.74□□□□□ -0.85
VPS60Q03390 FCY21YER060W 1587 nt9.74□□□□□ -0.85
VPS60Q03390 AGP3YFL055W 1677 nt9.74□□□□□ -0.85
VPS60Q03390 MSB4YOL112W 1479 nt9.73□□□□□ -0.85
VPS60Q03390 TAT2YOL020W 1779 nt9.73□□□□□ -0.85
VPS60Q03390 MDL2YPL270W 2322 nt9.72□□□□□ -0.85
VPS60Q03390 RBG1YAL036C 1110 nt9.72□□□□□ -0.85
VPS60Q03390 RAS2YNL098C 969 nt9.71□□□□□ -0.86
VPS60Q03390 SOL2YCR073W-A 948 nt9.7□□□□□ -0.86
VPS60Q03390 ASP3-1YLR155C 1089 nt9.7□□□□□ -0.86
VPS60Q03390 ASP3-2YLR157C 1089 nt9.7□□□□□ -0.86
VPS60Q03390 ASP3-3YLR158C 1089 nt9.7□□□□□ -0.86
VPS60Q03390 ASP3-4YLR160C 1089 nt9.7□□□□□ -0.86
VPS60Q03390 GPN2YOR262W 1044 nt9.7□□□□□ -0.86
VPS60Q03390 YGR012WYGR012W 1182 nt9.69□□□□□ -0.86
VPS60Q03390 NUC1YJL208C 990 nt9.69□□□□□ -0.86
VPS60Q03390 YMR262WYMR262W 942 nt9.68□□□□□ -0.86
VPS60Q03390 CSM1YCR086W 573 nt9.67□□□□□ -0.86
VPS60Q03390 SDH5YOL071W 489 nt9.67□□□□□ -0.86
VPS60Q03390 MTO1YGL236C 2010 nt9.66□□□□□ -0.86
VPS60Q03390 ITR2YOL103W 1830 nt9.66□□□□□ -0.86
VPS60Q03390 GTB1YDR221W 2109 nt9.65□□□□□ -0.86
VPS60Q03390 VMA11YPL234C 495 nt9.64□□□□□ -0.87
VPS60Q03390 TIP1YBR067C 633 nt9.62□□□□□ -0.87
VPS60Q03390 KRR1YCL059C 951 nt9.61□□□□□ -0.87
VPS60Q03390 MIM1YOL026C 342 nt9.61□□□□□ -0.87
VPS60Q03390 tD(GUC)BtD(GUC)B 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)DtD(GUC)D 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)G1tD(GUC)G1 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)G2tD(GUC)G2 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)I1tD(GUC)I1 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)I2tD(GUC)I2 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)J1tD(GUC)J1 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)J2tD(GUC)J2 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)J3tD(GUC)J3 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)J4tD(GUC)J4 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)KtD(GUC)K 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)L1tD(GUC)L1 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)L2tD(GUC)L2 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)MtD(GUC)M 72 nt9.6□□□□□ -0.87
VPS60Q03390 tD(GUC)OtD(GUC)O 72 nt9.6□□□□□ -0.87
VPS60Q03390 PRY1YJL079C 900 nt9.6□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms