Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 tD(GUC)J3tD(GUC)J3 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)J4tD(GUC)J4 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)KtD(GUC)K 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)L1tD(GUC)L1 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)L2tD(GUC)L2 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)MtD(GUC)M 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)OtD(GUC)O 72 nt7.95□□□□□ -1.14
CAF40P53829 PAU7YAR020C 168 nt7.95□□□□□ -1.14
CAF40P53829 YBL086CYBL086C 1401 nt7.95□□□□□ -1.14
CAF40P53829 SHH4YLR164W 507 nt7.94□□□□□ -1.14
CAF40P53829 DIF1YLR437C 402 nt7.94□□□□□ -1.14
CAF40P53829 UFO1YML088W 2007 nt7.93□□□□□ -1.14
CAF40P53829 CWP2YKL096W-A 279 nt7.93□□□□□ -1.14
CAF40P53829 YRF1-2YER190W 5046 nt7.91□□□□□ -1.14
CAF40P53829 SFL1YOR140W 2301 nt7.91□□□□□ -1.14
CAF40P53829 HBS1YKR084C 1836 nt7.91□□□□□ -1.14
CAF40P53829 YHR219WYHR219W 1875 nt7.91□□□□□ -1.14
CAF40P53829 LSR1LSR1 1175 nt7.9□□□□□ -1.14
CAF40P53829 HEM14YER014W 1620 nt7.89□□□□□ -1.15
CAF40P53829 PRE6YOL038W 765 nt7.89□□□□□ -1.15
CAF40P53829 LIP1YMR298W 453 nt7.88□□□□□ -1.15
CAF40P53829 DUS3YLR401C 2007 nt7.88□□□□□ -1.15
CAF40P53829 DUR3YHL016C 2208 nt7.87□□□□□ -1.15
CAF40P53829 PET8YNL003C 855 nt7.87□□□□□ -1.15
CAF40P53829 SPP2YOR148C 558 nt7.87□□□□□ -1.15
CAF40P53829 RET2YFR051C 1641 nt7.87□□□□□ -1.15
CAF40P53829 YHL019W-AYHL019W-A 594 nt7.86□□□□□ -1.15
CAF40P53829 OYE3YPL171C 1203 nt7.86□□□□□ -1.15
CAF40P53829 FMS1YMR020W 1527 nt7.86□□□□□ -1.15
CAF40P53829 VPS62YGR141W 1404 nt7.86□□□□□ -1.15
CAF40P53829 YDL086WYDL086W 822 nt7.85□□□□□ -1.15
CAF40P53829 SED1YDR077W 1017 nt7.85□□□□□ -1.15
CAF40P53829 TOM6YOR045W 186 nt7.85□□□□□ -1.15
CAF40P53829 FET5YFL041W 1869 nt7.85□□□□□ -1.15
CAF40P53829 YFL066CYFL066C 1179 nt7.84□□□□□ -1.15
CAF40P53829 MET30YIL046W 1923 nt7.84□□□□□ -1.16
CAF40P53829 TIM44YIL022W 1296 nt7.83□□□□□ -1.16
CAF40P53829 YAR028WYAR028W 705 nt7.83□□□□□ -1.16
CAF40P53829 SAM1YLR180W 1149 nt7.83□□□□□ -1.16
CAF40P53829 FRA1YLL029W 2250 nt7.81□□□□□ -1.16
CAF40P53829 YNL190WYNL190W 615 nt7.81□□□□□ -1.16
CAF40P53829 SFA1YDL168W 1161 nt7.8□□□□□ -1.16
CAF40P53829 LSM5YER146W 282 nt7.8□□□□□ -1.16
CAF40P53829 YMR262WYMR262W 942 nt7.8□□□□□ -1.16
CAF40P53829 POP2YNR052C 1302 nt7.79□□□□□ -1.16
CAF40P53829 YDR010CYDR010C 333 nt7.79□□□□□ -1.16
CAF40P53829 ADO1YJR105W 1023 nt7.79□□□□□ -1.16
CAF40P53829 LEU9YOR108W 1815 nt7.79□□□□□ -1.16
CAF40P53829 RPD3YNL330C 1302 nt7.78□□□□□ -1.16
CAF40P53829 LAS17YOR181W 1902 nt7.78□□□□□ -1.16
CAF40P53829 YER190C-AYER190C-A 576 nt7.78□□□□□ -1.16
CAF40P53829 YGR296C-AYGR296C-A 576 nt7.78□□□□□ -1.16
CAF40P53829 YML133W-AYML133W-A 576 nt7.78□□□□□ -1.16
CAF40P53829 YNL339W-AYNL339W-A 576 nt7.78□□□□□ -1.16
CAF40P53829 YPL283W-AYPL283W-A 576 nt7.78□□□□□ -1.16
CAF40P53829 TIF6YPR016C 738 nt7.78□□□□□ -1.16
CAF40P53829 MRPL8YJL063C 717 nt7.77□□□□□ -1.17
CAF40P53829 PEX2YJL210W 816 nt7.77□□□□□ -1.17
CAF40P53829 TOA2YKL058W 369 nt7.77□□□□□ -1.17
CAF40P53829 YFR018CYFR018C 1092 nt7.76□□□□□ -1.17
CAF40P53829 MET28YIR017C 564 nt7.76□□□□□ -1.17
CAF40P53829 YPS3YLR121C 1527 nt7.75□□□□□ -1.17
CAF40P53829 SAM2YDR502C 1155 nt7.74□□□□□ -1.17
CAF40P53829 HIP1YGR191W 1812 nt7.73□□□□□ -1.17
CAF40P53829 BRR1YPR057W 1026 nt7.73□□□□□ -1.17
CAF40P53829 FLR1YBR008C 1647 nt7.73□□□□□ -1.17
CAF40P53829 INH1YDL181W 258 nt7.72□□□□□ -1.17
CAF40P53829 ORT1YOR130C 879 nt7.72□□□□□ -1.17
CAF40P53829 RIM2YBR192W 1134 nt7.72□□□□□ -1.17
CAF40P53829 snR4snR4 186 nt7.72□□□□□ -1.17
CAF40P53829 PHO89YBR296C 1725 nt7.72□□□□□ -1.17
CAF40P53829 ADE16YLR028C 1776 nt7.71□□□□□ -1.17
CAF40P53829 DLD3YEL071W 1491 nt7.71□□□□□ -1.18
CAF40P53829 GND2YGR256W 1479 nt7.71□□□□□ -1.18
CAF40P53829 MTG2YHR168W 1557 nt7.71□□□□□ -1.18
CAF40P53829 ALP1YNL270C 1722 nt7.7□□□□□ -1.18
CAF40P53829 UTH1YKR042W 1098 nt7.7□□□□□ -1.18
CAF40P53829 NME1NME1 340 nt7.7□□□□□ -1.18
CAF40P53829 AKR2YOR034C 2250 nt7.69□□□□□ -1.18
CAF40P53829 TRT2tT(CGU)K 72 nt7.69□□□□□ -1.18
CAF40P53829 NSG2YNL156C 900 nt7.69□□□□□ -1.18
CAF40P53829 FIT3YOR383C 615 nt7.69□□□□□ -1.18
CAF40P53829 CLB6YGR109C 1143 nt7.68□□□□□ -1.18
CAF40P53829 DPL1YDR294C 1770 nt7.68□□□□□ -1.18
CAF40P53829 LEU4YNL104C 1860 nt7.68□□□□□ -1.18
CAF40P53829 THI6YPL214C 1623 nt7.67□□□□□ -1.18
CAF40P53829 YCR087WYCR087W 516 nt7.67□□□□□ -1.18
CAF40P53829 RPC31YNL151C 756 nt7.67□□□□□ -1.18
CAF40P53829 YPL251WYPL251W 303 nt7.67□□□□□ -1.18
CAF40P53829 PMA2YPL036W 2844 nt7.67□□□□□ -1.18
CAF40P53829 YDR510C-AYDR510C-A 117 nt7.66□□□□□ -1.18
CAF40P53829 UBA4YHR111W 1323 nt7.66□□□□□ -1.18
CAF40P53829 HXT12YIL170W 1374 nt7.66□□□□□ -1.18
CAF40P53829 PFS2YNL317W 1398 nt7.66□□□□□ -1.18
CAF40P53829 NPP2YEL016C 1482 nt7.66□□□□□ -1.18
CAF40P53829 FRT1YOR324C 1809 nt7.64□□□□□ -1.19
CAF40P53829 AIM34YMR003W 597 nt7.64□□□□□ -1.19
CAF40P53829 HXT11YOL156W 1704 nt7.64□□□□□ -1.19
CAF40P53829 TRP2YER090W 1524 nt7.63□□□□□ -1.19
CAF40P53829 MIR1YJR077C 936 nt7.63□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms