Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YNR029CYNR029C 1290 nt7.36□□□□□ -1.23
VPS55P47111 FUN14YAL008W 597 nt7.34□□□□□ -1.23
VPS55P47111 YMR103CYMR103C 363 nt7.34□□□□□ -1.23
VPS55P47111 TPO4YOR273C 1980 nt7.33□□□□□ -1.24
VPS55P47111 TRT2tT(CGU)K 72 nt7.33□□□□□ -1.24
VPS55P47111 MUP1YGR055W 1725 nt7.32□□□□□ -1.24
VPS55P47111 INA1YLR413W 2028 nt7.32□□□□□ -1.24
VPS55P47111 URA6YKL024C 615 nt7.32□□□□□ -1.24
VPS55P47111 ACO2YJL200C 2370 nt7.32□□□□□ -1.24
VPS55P47111 HXT12YIL170W 1374 nt7.32□□□□□ -1.24
VPS55P47111 UFO1YML088W 2007 nt7.31□□□□□ -1.24
VPS55P47111 GND2YGR256W 1479 nt7.3□□□□□ -1.24
VPS55P47111 VRG4YGL225W 1014 nt7.3□□□□□ -1.24
VPS55P47111 STE4YOR212W 1272 nt7.3□□□□□ -1.24
VPS55P47111 SSN3YPL042C 1668 nt7.28□□□□□ -1.24
VPS55P47111 RIB2YOL066C 1776 nt7.28□□□□□ -1.24
VPS55P47111 OYE3YPL171C 1203 nt7.28□□□□□ -1.24
VPS55P47111 SEC61YLR378C 1443 nt7.27□□□□□ -1.24
VPS55P47111 SAM2YDR502C 1155 nt7.27□□□□□ -1.25
VPS55P47111 YEL008WYEL008W 381 nt7.27□□□□□ -1.25
VPS55P47111 PET8YNL003C 855 nt7.27□□□□□ -1.25
VPS55P47111 LSB5YCL034W 1065 nt7.27□□□□□ -1.25
VPS55P47111 CSM1YCR086W 573 nt7.26□□□□□ -1.25
VPS55P47111 OXA1YER154W 1209 nt7.26□□□□□ -1.25
VPS55P47111 NUC1YJL208C 990 nt7.26□□□□□ -1.25
VPS55P47111 PHO23YNL097C 993 nt7.26□□□□□ -1.25
VPS55P47111 YLR349WYLR349W 507 nt7.25□□□□□ -1.25
VPS55P47111 YJL055WYJL055W 738 nt7.24□□□□□ -1.25
VPS55P47111 BNI5YNL166C 1347 nt7.24□□□□□ -1.25
VPS55P47111 MSC1YML128C 1542 nt7.23□□□□□ -1.25
VPS55P47111 YJL067WYJL067W 351 nt7.23□□□□□ -1.25
VPS55P47111 RPT5YOR117W 1305 nt7.22□□□□□ -1.25
VPS55P47111 RAD51YER095W 1203 nt7.21□□□□□ -1.26
VPS55P47111 YJL118WYJL118W 660 nt7.21□□□□□ -1.26
VPS55P47111 HOL1YNR055C 1761 nt7.2□□□□□ -1.26
VPS55P47111 GID7YCL039W 2238 nt7.2□□□□□ -1.26
VPS55P47111 RIB7YBR153W 735 nt7.2□□□□□ -1.26
VPS55P47111 ADH7YCR105W 1086 nt7.19□□□□□ -1.26
VPS55P47111 YER188WYER188W 720 nt7.19□□□□□ -1.26
VPS55P47111 CPD1YGR247W 720 nt7.17□□□□□ -1.26
VPS55P47111 URA8YJR103W 1737 nt7.16□□□□□ -1.26
VPS55P47111 RAS2YNL098C 969 nt7.16□□□□□ -1.26
VPS55P47111 SAM3YPL274W 1764 nt7.15□□□□□ -1.26
VPS55P47111 FUB1YCR076C 753 nt7.15□□□□□ -1.26
VPS55P47111 CWC15YDR163W 528 nt7.15□□□□□ -1.26
VPS55P47111 PAU15YIR041W 375 nt7.15□□□□□ -1.26
VPS55P47111 GPN2YOR262W 1044 nt7.15□□□□□ -1.26
VPS55P47111 DLD2YDL178W 1593 nt7.15□□□□□ -1.27
VPS55P47111 GAL3YDR009W 1563 nt7.15□□□□□ -1.27
VPS55P47111 CCT5YJR064W 1689 nt7.15□□□□□ -1.27
VPS55P47111 RSC8YFR037C 1674 nt7.14□□□□□ -1.27
VPS55P47111 FLR1YBR008C 1647 nt7.14□□□□□ -1.27
VPS55P47111 OYE2YHR179W 1203 nt7.13□□□□□ -1.27
VPS55P47111 YPS3YLR121C 1527 nt7.12□□□□□ -1.27
VPS55P47111 FMS1YMR020W 1527 nt7.12□□□□□ -1.27
VPS55P47111 OSH7YHR001W 1314 nt7.11□□□□□ -1.27
VPS55P47111 SPP2YOR148C 558 nt7.11□□□□□ -1.27
VPS55P47111 TPS1YBR126C 1488 nt7.11□□□□□ -1.27
VPS55P47111 EAF3YPR023C 1206 nt7.1□□□□□ -1.27
VPS55P47111 YMR209CYMR209C 1374 nt7.09□□□□□ -1.27
VPS55P47111 YHL008CYHL008C 1884 nt7.09□□□□□ -1.27
VPS55P47111 VPS62YGR141W 1404 nt7.08□□□□□ -1.28
VPS55P47111 THI72YOR192C 1800 nt7.07□□□□□ -1.28
VPS55P47111 TAF13YML098W 504 nt7.07□□□□□ -1.28
VPS55P47111 ACH1YBL015W 1581 nt7.05□□□□□ -1.28
VPS55P47111 HEM13YDR044W 987 nt7.05□□□□□ -1.28
VPS55P47111 YIL100C-AYIL100C-A 339 nt7.05□□□□□ -1.28
VPS55P47111 SOL2YCR073W-A 948 nt7.04□□□□□ -1.28
VPS55P47111 YDL086WYDL086W 822 nt7.04□□□□□ -1.28
VPS55P47111 tS(GCU)LtS(GCU)L 80 nt7.04□□□□□ -1.28
VPS55P47111 ESS1YJR017C 513 nt7.04□□□□□ -1.28
VPS55P47111 DAK2YFL053W 1776 nt7.03□□□□□ -1.28
VPS55P47111 SNZ1YMR096W 894 nt7.03□□□□□ -1.28
VPS55P47111 TMA23YMR269W 636 nt7.03□□□□□ -1.28
VPS55P47111 YPR126CYPR126C 309 nt7.03□□□□□ -1.28
VPS55P47111 GTB1YDR221W 2109 nt7.02□□□□□ -1.29
VPS55P47111 YNL024CYNL024C 741 nt7.02□□□□□ -1.29
VPS55P47111 MHF1YOL086W-A 273 nt7.01□□□□□ -1.29
VPS55P47111 IML3YBR107C 738 nt7.01□□□□□ -1.29
VPS55P47111 LSM5YER146W 282 nt7□□□□□ -1.29
VPS55P47111 DDI1YER143W 1287 nt6.99□□□□□ -1.29
VPS55P47111 IMO32YGR031W 1029 nt6.99□□□□□ -1.29
VPS55P47111 ASP3-1YLR155C 1089 nt6.99□□□□□ -1.29
VPS55P47111 ASP3-2YLR157C 1089 nt6.99□□□□□ -1.29
VPS55P47111 ASP3-3YLR158C 1089 nt6.99□□□□□ -1.29
VPS55P47111 ASP3-4YLR160C 1089 nt6.99□□□□□ -1.29
VPS55P47111 ILV3YJR016C 1758 nt6.99□□□□□ -1.29
VPS55P47111 CTI6YPL181W 1521 nt6.98□□□□□ -1.29
VPS55P47111 POT1YIL160C 1254 nt6.98□□□□□ -1.29
VPS55P47111 TAT2YOL020W 1779 nt6.97□□□□□ -1.29
VPS55P47111 PAU5YFL020C 369 nt6.97□□□□□ -1.29
VPS55P47111 STP3YLR375W 1032 nt6.97□□□□□ -1.29
VPS55P47111 OPI10YOL032W 741 nt6.97□□□□□ -1.29
VPS55P47111 RRT8YOL048C 1029 nt6.97□□□□□ -1.29
VPS55P47111 YRF1-2YER190W 5046 nt6.96□□□□□ -1.29
VPS55P47111 CCT2YIL142W 1584 nt6.96□□□□□ -1.29
VPS55P47111 YMR262WYMR262W 942 nt6.96□□□□□ -1.3
VPS55P47111 PGC1YPL206C 966 nt6.96□□□□□ -1.3
VPS55P47111 HXK1YFR053C 1458 nt6.96□□□□□ -1.3
VPS55P47111 UGP1YKL035W 1500 nt6.96□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 17 ms