Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 MAD2YJL030W 591 nt9.48□□□□□ -0.89
TY1A-JR2P47099 IDH1YNL037C 1083 nt9.48□□□□□ -0.89
TY1A-JR2P47099 BIO4YNR057C 714 nt9.48□□□□□ -0.89
TY1A-JR2P47099 YAP7YOL028C 738 nt9.48□□□□□ -0.89
TY1A-JR2P47099 OMA1YKR087C 1038 nt9.47□□□□□ -0.89
TY1A-JR2P47099 VPS20YMR077C 666 nt9.47□□□□□ -0.89
TY1A-JR2P47099 MRPS8YMR158W 468 nt9.47□□□□□ -0.89
TY1A-JR2P47099 TGS1YPL157W 948 nt9.47□□□□□ -0.89
TY1A-JR2P47099 ISR1YPR106W 1332 nt9.47□□□□□ -0.89
TY1A-JR2P47099 XDJ1YLR090W 1380 nt9.47□□□□□ -0.89
TY1A-JR2P47099 CBS1YDL069C 690 nt9.46□□□□□ -0.9
TY1A-JR2P47099 NPL3YDR432W 1245 nt9.46□□□□□ -0.9
TY1A-JR2P47099 YDR510C-AYDR510C-A 117 nt9.46□□□□□ -0.9
TY1A-JR2P47099 HOM6YJR139C 1080 nt9.46□□□□□ -0.9
TY1A-JR2P47099 YLR285C-AYLR285C-A 171 nt9.46□□□□□ -0.9
TY1A-JR2P47099 ENT5YDR153C 1236 nt9.45□□□□□ -0.9
TY1A-JR2P47099 RPF2YKR081C 1035 nt9.45□□□□□ -0.9
TY1A-JR2P47099 DSK2YMR276W 1122 nt9.45□□□□□ -0.9
TY1A-JR2P47099 POS5YPL188W 1245 nt9.45□□□□□ -0.9
TY1A-JR2P47099 LSB5YCL034W 1065 nt9.44□□□□□ -0.9
TY1A-JR2P47099 PRP4YPR178W 1398 nt9.44□□□□□ -0.9
TY1A-JR2P47099 DPS1YLL018C 1674 nt9.44□□□□□ -0.9
TY1A-JR2P47099 SNF1YDR477W 1902 nt9.43□□□□□ -0.9
TY1A-JR2P47099 ELO1YJL196C 933 nt9.43□□□□□ -0.9
TY1A-JR2P47099 AAC1YMR056C 930 nt9.43□□□□□ -0.9
TY1A-JR2P47099 IZH4YOL101C 939 nt9.43□□□□□ -0.9
TY1A-JR2P47099 TSR3YOR006C 942 nt9.43□□□□□ -0.9
TY1A-JR2P47099 SHE9YDR393W 1371 nt9.42□□□□□ -0.9
TY1A-JR2P47099 YEL076C-AYEL076C-A 651 nt9.42□□□□□ -0.9
TY1A-JR2P47099 YEL076CYEL076C 651 nt9.42□□□□□ -0.9
TY1A-JR2P47099 YLR464WYLR464W 651 nt9.42□□□□□ -0.9
TY1A-JR2P47099 PEX25YPL112C 1185 nt9.42□□□□□ -0.9
TY1A-JR2P47099 ATG29YPL166W 642 nt9.42□□□□□ -0.9
TY1A-JR2P47099 SPR1YOR190W 1338 nt9.41□□□□□ -0.9
TY1A-JR2P47099 CLB5YPR120C 1308 nt9.41□□□□□ -0.9
TY1A-JR2P47099 ERV41YML067C 1059 nt9.41□□□□□ -0.9
TY1A-JR2P47099 YOL038C-AYOL038C-A 96 nt9.41□□□□□ -0.9
TY1A-JR2P47099 SIM1YIL123W 1431 nt9.4□□□□□ -0.9
TY1A-JR2P47099 CHA1YCL064C 1083 nt9.4□□□□□ -0.9
TY1A-JR2P47099 YGR021WYGR021W 873 nt9.4□□□□□ -0.9
TY1A-JR2P47099 CSL4YNL232W 879 nt9.4□□□□□ -0.9
TY1A-JR2P47099 DCP1YOL149W 696 nt9.4□□□□□ -0.9
TY1A-JR2P47099 BTS1YPL069C 1008 nt9.4□□□□□ -0.9
TY1A-JR2P47099 RDN25-1RDN25-1 3396 nt9.4□□□□□ -0.9
TY1A-JR2P47099 RDN25-2RDN25-2 3396 nt9.4□□□□□ -0.9
TY1A-JR2P47099 RMD5YDR255C 1266 nt9.39□□□□□ -0.91
TY1A-JR2P47099 EDC1YGL222C 528 nt9.39□□□□□ -0.91
TY1A-JR2P47099 GTR1YML121W 933 nt9.39□□□□□ -0.91
TY1A-JR2P47099 MRPL24YMR193W 777 nt9.39□□□□□ -0.91
TY1A-JR2P47099 YPL068CYPL068C 882 nt9.39□□□□□ -0.91
TY1A-JR2P47099 SLM4YBR077C 489 nt9.39□□□□□ -0.91
TY1A-JR2P47099 PST2YDR032C 597 nt9.37□□□□□ -0.91
TY1A-JR2P47099 PCD1YLR151C 1023 nt9.37□□□□□ -0.91
TY1A-JR2P47099 SPG5YMR191W 1122 nt9.37□□□□□ -0.91
TY1A-JR2P47099 SSP2YOR242C 1116 nt9.37□□□□□ -0.91
TY1A-JR2P47099 YMR075C-AYMR075C-A 366 nt9.36□□□□□ -0.91
TY1A-JR2P47099 NCE102YPR149W 522 nt9.36□□□□□ -0.91
TY1A-JR2P47099 YCL048W-AYCL048W-A 240 nt9.36□□□□□ -0.91
TY1A-JR2P47099 BTT1YDR252W 450 nt9.35□□□□□ -0.91
TY1A-JR2P47099 ATG22YCL038C 1587 nt9.35□□□□□ -0.91
TY1A-JR2P47099 NPL6YMR091C 1308 nt9.34□□□□□ -0.91
TY1A-JR2P47099 CYT2YKL087C 675 nt9.34□□□□□ -0.91
TY1A-JR2P47099 CCA1YER168C 1641 nt9.34□□□□□ -0.91
TY1A-JR2P47099 BRL1YHR036W 1416 nt9.33□□□□□ -0.92
TY1A-JR2P47099 UBC5YDR059C 447 nt9.33□□□□□ -0.92
TY1A-JR2P47099 GFD1YMR255W 567 nt9.33□□□□□ -0.92
TY1A-JR2P47099 IDP3YNL009W 1263 nt9.33□□□□□ -0.92
TY1A-JR2P47099 COS6YGR295C 1146 nt9.32□□□□□ -0.92
TY1A-JR2P47099 YIL030W-AYIL030W-A 339 nt9.32□□□□□ -0.92
TY1A-JR2P47099 PCM1YEL058W 1674 nt9.32□□□□□ -0.92
TY1A-JR2P47099 MNP1YGL068W 585 nt9.31□□□□□ -0.92
TY1A-JR2P47099 OAC1YKL120W 975 nt9.31□□□□□ -0.92
TY1A-JR2P47099 BMT6YLR063W 1098 nt9.31□□□□□ -0.92
TY1A-JR2P47099 RPC53YDL150W 1269 nt9.3□□□□□ -0.92
TY1A-JR2P47099 YDR029WYDR029W 315 nt9.3□□□□□ -0.92
TY1A-JR2P47099 CMP2YML057W 1815 nt9.3□□□□□ -0.92
TY1A-JR2P47099 MED2YDL005C 1296 nt9.29□□□□□ -0.92
TY1A-JR2P47099 SEC28YIL076W 891 nt9.29□□□□□ -0.92
TY1A-JR2P47099 MOB1YIL106W 945 nt9.29□□□□□ -0.92
TY1A-JR2P47099 YJL152WYJL152W 360 nt9.29□□□□□ -0.92
TY1A-JR2P47099 AIM2YAL049C 741 nt9.29□□□□□ -0.92
TY1A-JR2P47099 RKM5YLR137W 1104 nt9.29□□□□□ -0.92
TY1A-JR2P47099 PGC1YPL206C 966 nt9.29□□□□□ -0.92
TY1A-JR2P47099 VAC17YCL063W 1272 nt9.28□□□□□ -0.92
TY1A-JR2P47099 SCEIQ0160 708 nt9.28□□□□□ -0.92
TY1A-JR2P47099 SAW1YAL027W 786 nt9.28□□□□□ -0.92
TY1A-JR2P47099 YAL037C-BYAL037C-B 975 nt9.28□□□□□ -0.92
TY1A-JR2P47099 SRL2YLR082C 1179 nt9.28□□□□□ -0.92
TY1A-JR2P47099 DED1YOR204W 1815 nt9.27□□□□□ -0.93
TY1A-JR2P47099 YDR541CYDR541C 1035 nt9.27□□□□□ -0.93
TY1A-JR2P47099 POP5YAL033W 522 nt9.27□□□□□ -0.93
TY1A-JR2P47099 SDS22YKL193C 1017 nt9.27□□□□□ -0.93
TY1A-JR2P47099 END3YNL084C 1050 nt9.27□□□□□ -0.93
TY1A-JR2P47099 SLZ1YNL196C 897 nt9.27□□□□□ -0.93
TY1A-JR2P47099 YOL079WYOL079W 399 nt9.27□□□□□ -0.93
TY1A-JR2P47099 ARL3YPL051W 597 nt9.27□□□□□ -0.93
TY1A-JR2P47099 YHR056W-AYHR056W-A 435 nt9.26□□□□□ -0.93
TY1A-JR2P47099 ADD66YKL206C 804 nt9.26□□□□□ -0.93
TY1A-JR2P47099 NDL1YLR254C 570 nt9.26□□□□□ -0.93
TY1A-JR2P47099 YKR005CYKR005C 1578 nt9.25□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 21.8 ms