Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 MAD2YJL030W 591 nt9.48□□□□□ -0.89
TY1A-LR1P0CX68 IDH1YNL037C 1083 nt9.48□□□□□ -0.89
TY1A-LR1P0CX68 BIO4YNR057C 714 nt9.48□□□□□ -0.89
TY1A-LR1P0CX68 YAP7YOL028C 738 nt9.48□□□□□ -0.89
TY1A-LR1P0CX68 OMA1YKR087C 1038 nt9.47□□□□□ -0.89
TY1A-LR1P0CX68 VPS20YMR077C 666 nt9.47□□□□□ -0.89
TY1A-LR1P0CX68 MRPS8YMR158W 468 nt9.47□□□□□ -0.89
TY1A-LR1P0CX68 TGS1YPL157W 948 nt9.47□□□□□ -0.89
TY1A-LR1P0CX68 ISR1YPR106W 1332 nt9.47□□□□□ -0.89
TY1A-LR1P0CX68 XDJ1YLR090W 1380 nt9.47□□□□□ -0.89
TY1A-LR1P0CX68 CBS1YDL069C 690 nt9.46□□□□□ -0.9
TY1A-LR1P0CX68 NPL3YDR432W 1245 nt9.46□□□□□ -0.9
TY1A-LR1P0CX68 YDR510C-AYDR510C-A 117 nt9.46□□□□□ -0.9
TY1A-LR1P0CX68 HOM6YJR139C 1080 nt9.46□□□□□ -0.9
TY1A-LR1P0CX68 YLR285C-AYLR285C-A 171 nt9.46□□□□□ -0.9
TY1A-LR1P0CX68 ENT5YDR153C 1236 nt9.45□□□□□ -0.9
TY1A-LR1P0CX68 RPF2YKR081C 1035 nt9.45□□□□□ -0.9
TY1A-LR1P0CX68 DSK2YMR276W 1122 nt9.45□□□□□ -0.9
TY1A-LR1P0CX68 POS5YPL188W 1245 nt9.45□□□□□ -0.9
TY1A-LR1P0CX68 LSB5YCL034W 1065 nt9.44□□□□□ -0.9
TY1A-LR1P0CX68 PRP4YPR178W 1398 nt9.44□□□□□ -0.9
TY1A-LR1P0CX68 DPS1YLL018C 1674 nt9.44□□□□□ -0.9
TY1A-LR1P0CX68 SNF1YDR477W 1902 nt9.43□□□□□ -0.9
TY1A-LR1P0CX68 ELO1YJL196C 933 nt9.43□□□□□ -0.9
TY1A-LR1P0CX68 AAC1YMR056C 930 nt9.43□□□□□ -0.9
TY1A-LR1P0CX68 IZH4YOL101C 939 nt9.43□□□□□ -0.9
TY1A-LR1P0CX68 TSR3YOR006C 942 nt9.43□□□□□ -0.9
TY1A-LR1P0CX68 SHE9YDR393W 1371 nt9.42□□□□□ -0.9
TY1A-LR1P0CX68 YEL076C-AYEL076C-A 651 nt9.42□□□□□ -0.9
TY1A-LR1P0CX68 YEL076CYEL076C 651 nt9.42□□□□□ -0.9
TY1A-LR1P0CX68 YLR464WYLR464W 651 nt9.42□□□□□ -0.9
TY1A-LR1P0CX68 PEX25YPL112C 1185 nt9.42□□□□□ -0.9
TY1A-LR1P0CX68 ATG29YPL166W 642 nt9.42□□□□□ -0.9
TY1A-LR1P0CX68 SPR1YOR190W 1338 nt9.41□□□□□ -0.9
TY1A-LR1P0CX68 CLB5YPR120C 1308 nt9.41□□□□□ -0.9
TY1A-LR1P0CX68 ERV41YML067C 1059 nt9.41□□□□□ -0.9
TY1A-LR1P0CX68 YOL038C-AYOL038C-A 96 nt9.41□□□□□ -0.9
TY1A-LR1P0CX68 SIM1YIL123W 1431 nt9.4□□□□□ -0.9
TY1A-LR1P0CX68 CHA1YCL064C 1083 nt9.4□□□□□ -0.9
TY1A-LR1P0CX68 YGR021WYGR021W 873 nt9.4□□□□□ -0.9
TY1A-LR1P0CX68 CSL4YNL232W 879 nt9.4□□□□□ -0.9
TY1A-LR1P0CX68 DCP1YOL149W 696 nt9.4□□□□□ -0.9
TY1A-LR1P0CX68 BTS1YPL069C 1008 nt9.4□□□□□ -0.9
TY1A-LR1P0CX68 RDN25-1RDN25-1 3396 nt9.4□□□□□ -0.9
TY1A-LR1P0CX68 RDN25-2RDN25-2 3396 nt9.4□□□□□ -0.9
TY1A-LR1P0CX68 RMD5YDR255C 1266 nt9.39□□□□□ -0.91
TY1A-LR1P0CX68 EDC1YGL222C 528 nt9.39□□□□□ -0.91
TY1A-LR1P0CX68 GTR1YML121W 933 nt9.39□□□□□ -0.91
TY1A-LR1P0CX68 MRPL24YMR193W 777 nt9.39□□□□□ -0.91
TY1A-LR1P0CX68 YPL068CYPL068C 882 nt9.39□□□□□ -0.91
TY1A-LR1P0CX68 SLM4YBR077C 489 nt9.39□□□□□ -0.91
TY1A-LR1P0CX68 PST2YDR032C 597 nt9.37□□□□□ -0.91
TY1A-LR1P0CX68 PCD1YLR151C 1023 nt9.37□□□□□ -0.91
TY1A-LR1P0CX68 SPG5YMR191W 1122 nt9.37□□□□□ -0.91
TY1A-LR1P0CX68 SSP2YOR242C 1116 nt9.37□□□□□ -0.91
TY1A-LR1P0CX68 YMR075C-AYMR075C-A 366 nt9.36□□□□□ -0.91
TY1A-LR1P0CX68 NCE102YPR149W 522 nt9.36□□□□□ -0.91
TY1A-LR1P0CX68 YCL048W-AYCL048W-A 240 nt9.36□□□□□ -0.91
TY1A-LR1P0CX68 BTT1YDR252W 450 nt9.35□□□□□ -0.91
TY1A-LR1P0CX68 ATG22YCL038C 1587 nt9.35□□□□□ -0.91
TY1A-LR1P0CX68 NPL6YMR091C 1308 nt9.34□□□□□ -0.91
TY1A-LR1P0CX68 CYT2YKL087C 675 nt9.34□□□□□ -0.91
TY1A-LR1P0CX68 CCA1YER168C 1641 nt9.34□□□□□ -0.91
TY1A-LR1P0CX68 BRL1YHR036W 1416 nt9.33□□□□□ -0.92
TY1A-LR1P0CX68 UBC5YDR059C 447 nt9.33□□□□□ -0.92
TY1A-LR1P0CX68 GFD1YMR255W 567 nt9.33□□□□□ -0.92
TY1A-LR1P0CX68 IDP3YNL009W 1263 nt9.33□□□□□ -0.92
TY1A-LR1P0CX68 COS6YGR295C 1146 nt9.32□□□□□ -0.92
TY1A-LR1P0CX68 YIL030W-AYIL030W-A 339 nt9.32□□□□□ -0.92
TY1A-LR1P0CX68 PCM1YEL058W 1674 nt9.32□□□□□ -0.92
TY1A-LR1P0CX68 MNP1YGL068W 585 nt9.31□□□□□ -0.92
TY1A-LR1P0CX68 OAC1YKL120W 975 nt9.31□□□□□ -0.92
TY1A-LR1P0CX68 BMT6YLR063W 1098 nt9.31□□□□□ -0.92
TY1A-LR1P0CX68 RPC53YDL150W 1269 nt9.3□□□□□ -0.92
TY1A-LR1P0CX68 YDR029WYDR029W 315 nt9.3□□□□□ -0.92
TY1A-LR1P0CX68 CMP2YML057W 1815 nt9.3□□□□□ -0.92
TY1A-LR1P0CX68 MED2YDL005C 1296 nt9.29□□□□□ -0.92
TY1A-LR1P0CX68 SEC28YIL076W 891 nt9.29□□□□□ -0.92
TY1A-LR1P0CX68 MOB1YIL106W 945 nt9.29□□□□□ -0.92
TY1A-LR1P0CX68 YJL152WYJL152W 360 nt9.29□□□□□ -0.92
TY1A-LR1P0CX68 AIM2YAL049C 741 nt9.29□□□□□ -0.92
TY1A-LR1P0CX68 RKM5YLR137W 1104 nt9.29□□□□□ -0.92
TY1A-LR1P0CX68 PGC1YPL206C 966 nt9.29□□□□□ -0.92
TY1A-LR1P0CX68 VAC17YCL063W 1272 nt9.28□□□□□ -0.92
TY1A-LR1P0CX68 SCEIQ0160 708 nt9.28□□□□□ -0.92
TY1A-LR1P0CX68 SAW1YAL027W 786 nt9.28□□□□□ -0.92
TY1A-LR1P0CX68 YAL037C-BYAL037C-B 975 nt9.28□□□□□ -0.92
TY1A-LR1P0CX68 SRL2YLR082C 1179 nt9.28□□□□□ -0.92
TY1A-LR1P0CX68 DED1YOR204W 1815 nt9.27□□□□□ -0.93
TY1A-LR1P0CX68 YDR541CYDR541C 1035 nt9.27□□□□□ -0.93
TY1A-LR1P0CX68 POP5YAL033W 522 nt9.27□□□□□ -0.93
TY1A-LR1P0CX68 SDS22YKL193C 1017 nt9.27□□□□□ -0.93
TY1A-LR1P0CX68 END3YNL084C 1050 nt9.27□□□□□ -0.93
TY1A-LR1P0CX68 SLZ1YNL196C 897 nt9.27□□□□□ -0.93
TY1A-LR1P0CX68 YOL079WYOL079W 399 nt9.27□□□□□ -0.93
TY1A-LR1P0CX68 ARL3YPL051W 597 nt9.27□□□□□ -0.93
TY1A-LR1P0CX68 YHR056W-AYHR056W-A 435 nt9.26□□□□□ -0.93
TY1A-LR1P0CX68 ADD66YKL206C 804 nt9.26□□□□□ -0.93
TY1A-LR1P0CX68 NDL1YLR254C 570 nt9.26□□□□□ -0.93
TY1A-LR1P0CX68 YKR005CYKR005C 1578 nt9.25□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 112.7 ms