Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 TAF13YML098W 504 nt12.08□□□□□ -0.48
TY4B-HP0C2J7 BNI5YNL166C 1347 nt12.07□□□□□ -0.48
TY4B-HP0C2J7 DBP1YPL119C 1854 nt12.07□□□□□ -0.48
TY4B-HP0C2J7 YMR262WYMR262W 942 nt12.07□□□□□ -0.48
TY4B-HP0C2J7 POP2YNR052C 1302 nt12.06□□□□□ -0.48
TY4B-HP0C2J7 GSF2YML048W 1212 nt12.06□□□□□ -0.48
TY4B-HP0C2J7 SSN3YPL042C 1668 nt12.06□□□□□ -0.48
TY4B-HP0C2J7 IRC24YIR036C 792 nt12.04□□□□□ -0.48
TY4B-HP0C2J7 MHF1YOL086W-A 273 nt12.04□□□□□ -0.48
TY4B-HP0C2J7 PHO23YNL097C 993 nt12.03□□□□□ -0.48
TY4B-HP0C2J7 YMR103CYMR103C 363 nt12.02□□□□□ -0.49
TY4B-HP0C2J7 YPR126CYPR126C 309 nt12.02□□□□□ -0.49
TY4B-HP0C2J7 GND2YGR256W 1479 nt12.01□□□□□ -0.49
TY4B-HP0C2J7 TRT2tT(CGU)K 72 nt12□□□□□ -0.49
TY4B-HP0C2J7 PAR32YDL173W 888 nt12□□□□□ -0.49
TY4B-HP0C2J7 HXT1YHR094C 1713 nt12□□□□□ -0.49
TY4B-HP0C2J7 TOA2YKL058W 369 nt12□□□□□ -0.49
TY4B-HP0C2J7 RIB7YBR153W 735 nt11.96□□□□□ -0.49
TY4B-HP0C2J7 TUB4YLR212C 1422 nt11.96□□□□□ -0.5
TY4B-HP0C2J7 RIB1YBL033C 1038 nt11.95□□□□□ -0.5
TY4B-HP0C2J7 YER152W-AYER152W-A 567 nt11.94□□□□□ -0.5
TY4B-HP0C2J7 BMT6YLR063W 1098 nt11.93□□□□□ -0.5
TY4B-HP0C2J7 CTI6YPL181W 1521 nt11.91□□□□□ -0.5
TY4B-HP0C2J7 LEU9YOR108W 1815 nt11.89□□□□□ -0.51
TY4B-HP0C2J7 UFO1YML088W 2007 nt11.89□□□□□ -0.51
TY4B-HP0C2J7 RPT5YOR117W 1305 nt11.89□□□□□ -0.51
TY4B-HP0C2J7 BRR1YPR057W 1026 nt11.89□□□□□ -0.51
TY4B-HP0C2J7 DPS1YLL018C 1674 nt11.89□□□□□ -0.51
TY4B-HP0C2J7 OYE2YHR179W 1203 nt11.88□□□□□ -0.51
TY4B-HP0C2J7 SNF1YDR477W 1902 nt11.87□□□□□ -0.51
TY4B-HP0C2J7 QDR2YIL121W 1629 nt11.86□□□□□ -0.51
TY4B-HP0C2J7 YIA6YIL006W 1122 nt11.86□□□□□ -0.51
TY4B-HP0C2J7 POT1YIL160C 1254 nt11.86□□□□□ -0.51
TY4B-HP0C2J7 YCP4YCR004C 744 nt11.85□□□□□ -0.51
TY4B-HP0C2J7 DDI1YER143W 1287 nt11.85□□□□□ -0.51
TY4B-HP0C2J7 MSC1YML128C 1542 nt11.85□□□□□ -0.51
TY4B-HP0C2J7 TPS1YBR126C 1488 nt11.84□□□□□ -0.51
TY4B-HP0C2J7 YCR025CYCR025C 411 nt11.84□□□□□ -0.51
TY4B-HP0C2J7 SOD2YHR008C 702 nt11.83□□□□□ -0.51
TY4B-HP0C2J7 HIF1YLL022C 1158 nt11.83□□□□□ -0.51
TY4B-HP0C2J7 SAM2YDR502C 1155 nt11.83□□□□□ -0.52
TY4B-HP0C2J7 DAK2YFL053W 1776 nt11.82□□□□□ -0.52
TY4B-HP0C2J7 NAS2YIL007C 663 nt11.82□□□□□ -0.52
TY4B-HP0C2J7 OYE3YPL171C 1203 nt11.81□□□□□ -0.52
TY4B-HP0C2J7 KRE1YNL322C 942 nt11.8□□□□□ -0.52
TY4B-HP0C2J7 SHY1YGR112W 1170 nt11.79□□□□□ -0.52
TY4B-HP0C2J7 PRP4YPR178W 1398 nt11.77□□□□□ -0.53
TY4B-HP0C2J7 ACO2YJL200C 2370 nt11.77□□□□□ -0.53
TY4B-HP0C2J7 FUB1YCR076C 753 nt11.76□□□□□ -0.53
TY4B-HP0C2J7 NIF3YGL221C 867 nt11.76□□□□□ -0.53
TY4B-HP0C2J7 SEC61YLR378C 1443 nt11.76□□□□□ -0.53
TY4B-HP0C2J7 FLR1YBR008C 1647 nt11.76□□□□□ -0.53
TY4B-HP0C2J7 PAC11YDR488C 1602 nt11.76□□□□□ -0.53
TY4B-HP0C2J7 LYS20YDL182W 1287 nt11.71□□□□□ -0.54
TY4B-HP0C2J7 YER188WYER188W 720 nt11.7□□□□□ -0.54
TY4B-HP0C2J7 EAF3YPR023C 1206 nt11.7□□□□□ -0.54
TY4B-HP0C2J7 RAS2YNL098C 969 nt11.69□□□□□ -0.54
TY4B-HP0C2J7 IGD1YFR017C 588 nt11.68□□□□□ -0.54
TY4B-HP0C2J7 RSC8YFR037C 1674 nt11.68□□□□□ -0.54
TY4B-HP0C2J7 ADE8YDR408C 645 nt11.67□□□□□ -0.54
TY4B-HP0C2J7 TMA23YMR269W 636 nt11.67□□□□□ -0.54
TY4B-HP0C2J7 FLX1YIL134W 936 nt11.65□□□□□ -0.54
TY4B-HP0C2J7 URA6YKL024C 615 nt11.65□□□□□ -0.54
TY4B-HP0C2J7 YPS3YLR121C 1527 nt11.65□□□□□ -0.54
TY4B-HP0C2J7 tA(AGC)DtA(AGC)D 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)FtA(AGC)F 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)GtA(AGC)G 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)HtA(AGC)H 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)JtA(AGC)J 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)K1tA(AGC)K1 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)K2tA(AGC)K2 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)LtA(AGC)L 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)M1tA(AGC)M1 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)M2tA(AGC)M2 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 tA(AGC)PtA(AGC)P 73 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 SPS100YHR139C 981 nt11.65□□□□□ -0.55
TY4B-HP0C2J7 YFR036W-AYFR036W-A 651 nt11.64□□□□□ -0.55
TY4B-HP0C2J7 SWM1YDR260C 513 nt11.63□□□□□ -0.55
TY4B-HP0C2J7 YNL024CYNL024C 741 nt11.63□□□□□ -0.55
TY4B-HP0C2J7 SAM50YNL026W 1455 nt11.63□□□□□ -0.55
TY4B-HP0C2J7 ABZ2YMR289W 1125 nt11.61□□□□□ -0.55
TY4B-HP0C2J7 SPE2YOL052C 1191 nt11.61□□□□□ -0.55
TY4B-HP0C2J7 IML3YBR107C 738 nt11.6□□□□□ -0.55
TY4B-HP0C2J7 BIO5YNR056C 1686 nt11.6□□□□□ -0.55
TY4B-HP0C2J7 PHB2YGR231C 933 nt11.59□□□□□ -0.55
TY4B-HP0C2J7 BUD20YLR074C 501 nt11.58□□□□□ -0.56
TY4B-HP0C2J7 LSM5YER146W 282 nt11.58□□□□□ -0.56
TY4B-HP0C2J7 PET8YNL003C 855 nt11.58□□□□□ -0.56
TY4B-HP0C2J7 IPL1YPL209C 1104 nt11.58□□□□□ -0.56
TY4B-HP0C2J7 HEM13YDR044W 987 nt11.57□□□□□ -0.56
TY4B-HP0C2J7 THP3YPR045C 1413 nt11.56□□□□□ -0.56
TY4B-HP0C2J7 BOR1YNL275W 1731 nt11.55□□□□□ -0.56
TY4B-HP0C2J7 DLD2YDL178W 1593 nt11.54□□□□□ -0.56
TY4B-HP0C2J7 TGA1tA(UGC)A 73 nt11.54□□□□□ -0.56
TY4B-HP0C2J7 tA(UGC)EtA(UGC)E 73 nt11.54□□□□□ -0.56
TY4B-HP0C2J7 tA(UGC)GtA(UGC)G 73 nt11.54□□□□□ -0.56
TY4B-HP0C2J7 tA(UGC)LtA(UGC)L 73 nt11.54□□□□□ -0.56
TY4B-HP0C2J7 tA(UGC)OtA(UGC)O 73 nt11.54□□□□□ -0.56
TY4B-HP0C2J7 OXA1YER154W 1209 nt11.54□□□□□ -0.56
TY4B-HP0C2J7 OSH7YHR001W 1314 nt11.52□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms