Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 TUB4YLR212C 1422 nt14.62□□□□□ -0.07
TY2B-LR1P0C2J3 PAR32YDL173W 888 nt14.62□□□□□ -0.07
TY2B-LR1P0C2J3 YIA6YIL006W 1122 nt14.62□□□□□ -0.07
TY2B-LR1P0C2J3 CDD1YLR245C 429 nt14.6□□□□□ -0.07
TY2B-LR1P0C2J3 GSF2YML048W 1212 nt14.6□□□□□ -0.07
TY2B-LR1P0C2J3 LIP1YMR298W 453 nt14.6□□□□□ -0.07
TY2B-LR1P0C2J3 YBL086CYBL086C 1401 nt14.59□□□□□ -0.07
TY2B-LR1P0C2J3 NUC1YJL208C 990 nt14.57□□□□□ -0.08
TY2B-LR1P0C2J3 YGR259CYGR259C 441 nt14.57□□□□□ -0.08
TY2B-LR1P0C2J3 YKR005CYKR005C 1578 nt14.56□□□□□ -0.08
TY2B-LR1P0C2J3 YMR103CYMR103C 363 nt14.54□□□□□ -0.08
TY2B-LR1P0C2J3 MHF1YOL086W-A 273 nt14.54□□□□□ -0.08
TY2B-LR1P0C2J3 BNI5YNL166C 1347 nt14.54□□□□□ -0.08
TY2B-LR1P0C2J3 IRC24YIR036C 792 nt14.52□□□□□ -0.09
TY2B-LR1P0C2J3 YPR126CYPR126C 309 nt14.52□□□□□ -0.09
TY2B-LR1P0C2J3 SSN3YPL042C 1668 nt14.52□□□□□ -0.09
TY2B-LR1P0C2J3 KRE1YNL322C 942 nt14.51□□□□□ -0.09
TY2B-LR1P0C2J3 YCP4YCR004C 744 nt14.48□□□□□ -0.09
TY2B-LR1P0C2J3 SAM35YHR083W 990 nt14.48□□□□□ -0.09
TY2B-LR1P0C2J3 CTI6YPL181W 1521 nt14.46□□□□□ -0.1
TY2B-LR1P0C2J3 GND2YGR256W 1479 nt14.45□□□□□ -0.1
TY2B-LR1P0C2J3 TOA2YKL058W 369 nt14.45□□□□□ -0.1
TY2B-LR1P0C2J3 YCR025CYCR025C 411 nt14.44□□□□□ -0.1
TY2B-LR1P0C2J3 RIB7YBR153W 735 nt14.43□□□□□ -0.1
TY2B-LR1P0C2J3 POT1YIL160C 1254 nt14.42□□□□□ -0.1
TY2B-LR1P0C2J3 BMT6YLR063W 1098 nt14.42□□□□□ -0.1
TY2B-LR1P0C2J3 ACO2YJL200C 2370 nt14.41□□□□□ -0.1
TY2B-LR1P0C2J3 PHO23YNL097C 993 nt14.4□□□□□ -0.1
TY2B-LR1P0C2J3 RPT5YOR117W 1305 nt14.38□□□□□ -0.11
TY2B-LR1P0C2J3 DBP1YPL119C 1854 nt14.38□□□□□ -0.11
TY2B-LR1P0C2J3 TRT2tT(CGU)K 72 nt14.36□□□□□ -0.11
TY2B-LR1P0C2J3 NAS2YIL007C 663 nt14.36□□□□□ -0.11
TY2B-LR1P0C2J3 BUD20YLR074C 501 nt14.36□□□□□ -0.11
TY2B-LR1P0C2J3 TPS1YBR126C 1488 nt14.36□□□□□ -0.11
TY2B-LR1P0C2J3 HXT1YHR094C 1713 nt14.35□□□□□ -0.11
TY2B-LR1P0C2J3 LYS20YDL182W 1287 nt14.34□□□□□ -0.11
TY2B-LR1P0C2J3 BRR1YPR057W 1026 nt14.34□□□□□ -0.11
TY2B-LR1P0C2J3 SAM50YNL026W 1455 nt14.34□□□□□ -0.11
TY2B-LR1P0C2J3 NIF3YGL221C 867 nt14.34□□□□□ -0.11
TY2B-LR1P0C2J3 DDI1YER143W 1287 nt14.32□□□□□ -0.12
TY2B-LR1P0C2J3 OYE2YHR179W 1203 nt14.3□□□□□ -0.12
TY2B-LR1P0C2J3 DAK2YFL053W 1776 nt14.28□□□□□ -0.12
TY2B-LR1P0C2J3 IGD1YFR017C 588 nt14.27□□□□□ -0.13
TY2B-LR1P0C2J3 HIF1YLL022C 1158 nt14.25□□□□□ -0.13
TY2B-LR1P0C2J3 LEU9YOR108W 1815 nt14.25□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)DtA(AGC)D 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)FtA(AGC)F 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)GtA(AGC)G 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)HtA(AGC)H 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)JtA(AGC)J 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)K1tA(AGC)K1 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)K2tA(AGC)K2 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)LtA(AGC)L 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)M1tA(AGC)M1 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)M2tA(AGC)M2 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 tA(AGC)PtA(AGC)P 73 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 MSC1YML128C 1542 nt14.23□□□□□ -0.13
TY2B-LR1P0C2J3 SAM2YDR502C 1155 nt14.22□□□□□ -0.13
TY2B-LR1P0C2J3 UFO1YML088W 2007 nt14.21□□□□□ -0.13
TY2B-LR1P0C2J3 SWM1YDR260C 513 nt14.21□□□□□ -0.13
TY2B-LR1P0C2J3 FLX1YIL134W 936 nt14.16□□□□□ -0.14
TY2B-LR1P0C2J3 FUB1YCR076C 753 nt14.14□□□□□ -0.15
TY2B-LR1P0C2J3 IPL1YPL209C 1104 nt14.14□□□□□ -0.15
TY2B-LR1P0C2J3 SPE2YOL052C 1191 nt14.13□□□□□ -0.15
TY2B-LR1P0C2J3 RAS2YNL098C 969 nt14.12□□□□□ -0.15
TY2B-LR1P0C2J3 OYE3YPL171C 1203 nt14.12□□□□□ -0.15
TY2B-LR1P0C2J3 EAF3YPR023C 1206 nt14.12□□□□□ -0.15
TY2B-LR1P0C2J3 TGA1tA(UGC)A 73 nt14.11□□□□□ -0.15
TY2B-LR1P0C2J3 tA(UGC)EtA(UGC)E 73 nt14.11□□□□□ -0.15
TY2B-LR1P0C2J3 tA(UGC)GtA(UGC)G 73 nt14.11□□□□□ -0.15
TY2B-LR1P0C2J3 tA(UGC)LtA(UGC)L 73 nt14.11□□□□□ -0.15
TY2B-LR1P0C2J3 tA(UGC)OtA(UGC)O 73 nt14.11□□□□□ -0.15
TY2B-LR1P0C2J3 FLR1YBR008C 1647 nt14.1□□□□□ -0.15
TY2B-LR1P0C2J3 SHY1YGR112W 1170 nt14.09□□□□□ -0.15
TY2B-LR1P0C2J3 SEC61YLR378C 1443 nt14.09□□□□□ -0.15
TY2B-LR1P0C2J3 TMA23YMR269W 636 nt14.09□□□□□ -0.15
TY2B-LR1P0C2J3 YFR036W-AYFR036W-A 651 nt14.08□□□□□ -0.16
TY2B-LR1P0C2J3 IML3YBR107C 738 nt14.08□□□□□ -0.16
TY2B-LR1P0C2J3 YNL024CYNL024C 741 nt14.07□□□□□ -0.16
TY2B-LR1P0C2J3 YER188WYER188W 720 nt14.06□□□□□ -0.16
TY2B-LR1P0C2J3 FCY1YPR062W 477 nt14.06□□□□□ -0.16
TY2B-LR1P0C2J3 PHB2YGR231C 933 nt14.06□□□□□ -0.16
TY2B-LR1P0C2J3 SPS100YHR139C 981 nt14.06□□□□□ -0.16
TY2B-LR1P0C2J3 ADE8YDR408C 645 nt14.04□□□□□ -0.16
TY2B-LR1P0C2J3 DPS1YLL018C 1674 nt14.04□□□□□ -0.16
TY2B-LR1P0C2J3 LSM5YER146W 282 nt14.02□□□□□ -0.16
TY2B-LR1P0C2J3 YMR007WYMR007W 381 nt14.02□□□□□ -0.16
TY2B-LR1P0C2J3 ADH3YMR083W 1128 nt14.02□□□□□ -0.16
TY2B-LR1P0C2J3 SNF1YDR477W 1902 nt14.02□□□□□ -0.17
TY2B-LR1P0C2J3 GRH1YDR517W 1119 nt14.01□□□□□ -0.17
TY2B-LR1P0C2J3 KAE1YKR038C 1161 nt14.01□□□□□ -0.17
TY2B-LR1P0C2J3 ABZ2YMR289W 1125 nt14□□□□□ -0.17
TY2B-LR1P0C2J3 PAU21YOR394W 495 nt14□□□□□ -0.17
TY2B-LR1P0C2J3 PAU22YPL282C 495 nt14□□□□□ -0.17
TY2B-LR1P0C2J3 MFG1YDL233W 1377 nt13.99□□□□□ -0.17
TY2B-LR1P0C2J3 HOG1YLR113W 1308 nt13.98□□□□□ -0.17
TY2B-LR1P0C2J3 YOR343CYOR343C 327 nt13.98□□□□□ -0.17
TY2B-LR1P0C2J3 PRP4YPR178W 1398 nt13.97□□□□□ -0.17
TY2B-LR1P0C2J3 THP3YPR045C 1413 nt13.97□□□□□ -0.17
TY2B-LR1P0C2J3 RPL12BYDR418W 498 nt13.96□□□□□ -0.17
Retrieved 100 of 7,029 protein–RNA pairs in 86.7 ms