Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 ECO1YFR027W 846 nt3.26□□□□□ -1.89
SEF1P34228 PGD1YGL025C 1194 nt3.26□□□□□ -1.89
SEF1P34228 PAU11YGL261C 363 nt3.26□□□□□ -1.89
SEF1P34228 YGR017WYGR017W 894 nt3.26□□□□□ -1.89
SEF1P34228 YGR051CYGR051C 324 nt3.26□□□□□ -1.89
SEF1P34228 LIN1YHR156C 1023 nt3.26□□□□□ -1.89
SEF1P34228 AIM18YHR198C 966 nt3.26□□□□□ -1.89
SEF1P34228 CDC8YJR057W 651 nt3.26□□□□□ -1.89
SEF1P34228 PAU4YLR461W 363 nt3.26□□□□□ -1.89
SEF1P34228 YOR387CYOR387C 621 nt3.26□□□□□ -1.89
SEF1P34228 SPT10YJL127C 1923 nt3.26□□□□□ -1.89
SEF1P34228 YPS6YIR039C 1614 nt3.26□□□□□ -1.89
SEF1P34228 SPA2YLL021W 4401 nt3.25□□□□□ -1.89
SEF1P34228 POL4YCR014C 1749 nt3.25□□□□□ -1.89
SEF1P34228 YDL242WYDL242W 354 nt3.25□□□□□ -1.89
SEF1P34228 SLU7YDR088C 1149 nt3.25□□□□□ -1.89
SEF1P34228 HMO1YDR174W 741 nt3.25□□□□□ -1.89
SEF1P34228 RAV2YDR202C 1056 nt3.25□□□□□ -1.89
SEF1P34228 LOC1YFR001W 615 nt3.25□□□□□ -1.89
SEF1P34228 PIR1YKL164C 1026 nt3.25□□□□□ -1.89
SEF1P34228 TPK3YKL166C 1197 nt3.25□□□□□ -1.89
SEF1P34228 YPT7YML001W 627 nt3.25□□□□□ -1.89
SEF1P34228 IMP4YNL075W 873 nt3.25□□□□□ -1.89
SEF1P34228 GCY1YOR120W 939 nt3.25□□□□□ -1.89
SEF1P34228 YBR063CYBR063C 1215 nt3.25□□□□□ -1.89
SEF1P34228 RRP15YPR143W 753 nt3.25□□□□□ -1.89
SEF1P34228 CMD1YBR109C 444 nt3.25□□□□□ -1.89
SEF1P34228 snR35snR35 204 nt3.25□□□□□ -1.89
SEF1P34228 DER1YBR201W 636 nt3.25□□□□□ -1.89
SEF1P34228 BMS1YPL217C 3552 nt3.25□□□□□ -1.89
SEF1P34228 KRE2YDR483W 1329 nt3.24□□□□□ -1.89
SEF1P34228 SQS1YNL224C 2304 nt3.24□□□□□ -1.89
SEF1P34228 YDR250CYDR250C 276 nt3.24□□□□□ -1.89
SEF1P34228 STE14YDR410C 720 nt3.24□□□□□ -1.89
SEF1P34228 AIM11YER093C-A 414 nt3.24□□□□□ -1.89
SEF1P34228 YGR160WYGR160W 612 nt3.24□□□□□ -1.89
SEF1P34228 YHR054CYHR054C 1065 nt3.24□□□□□ -1.89
SEF1P34228 DAL2YIR029W 1032 nt3.24□□□□□ -1.89
SEF1P34228 ATG27YJL178C 816 nt3.24□□□□□ -1.89
SEF1P34228 YKL069WYKL069W 543 nt3.24□□□□□ -1.89
SEF1P34228 YKL123WYKL123W 381 nt3.24□□□□□ -1.89
SEF1P34228 SDO1YLR022C 753 nt3.24□□□□□ -1.89
SEF1P34228 RPN13YLR421C 471 nt3.24□□□□□ -1.89
SEF1P34228 TVP18YMR071C 504 nt3.24□□□□□ -1.89
SEF1P34228 YNR025CYNR025C 360 nt3.24□□□□□ -1.89
SEF1P34228 RSM19YNR037C 276 nt3.24□□□□□ -1.89
SEF1P34228 YCL002CYCL002C 792 nt3.24□□□□□ -1.89
SEF1P34228 SYO1YDL063C 1863 nt3.24□□□□□ -1.89
SEF1P34228 OSH3YHR073W 2991 nt3.23□□□□□ -1.89
SEF1P34228 FMN1YDR236C 657 nt3.23□□□□□ -1.89
SEF1P34228 YDR248CYDR248C 582 nt3.23□□□□□ -1.89
SEF1P34228 YER039C-AYER039C-A 219 nt3.23□□□□□ -1.89
SEF1P34228 YGL039WYGL039W 1047 nt3.23□□□□□ -1.89
SEF1P34228 BCD1YHR040W 1101 nt3.23□□□□□ -1.89
SEF1P34228 YHR180WYHR180W 492 nt3.23□□□□□ -1.89
SEF1P34228 YHR212CYHR212C 336 nt3.23□□□□□ -1.89
SEF1P34228 SDP1YIL113W 630 nt3.23□□□□□ -1.89
SEF1P34228 YJL147CYJL147C 1149 nt3.23□□□□□ -1.89
SEF1P34228 YAR060CYAR060C 336 nt3.23□□□□□ -1.89
SEF1P34228 GIM5YML094W 492 nt3.23□□□□□ -1.89
SEF1P34228 ATP11YNL315C 957 nt3.23□□□□□ -1.89
SEF1P34228 HFM1YGL251C 3564 nt3.23□□□□□ -1.89
SEF1P34228 MSH2YOL090W 2895 nt3.22□□□□□ -1.89
SEF1P34228 YPR022CYPR022C 3402 nt3.22□□□□□ -1.89
SEF1P34228 MSD1YPL104W 1977 nt3.22□□□□□ -1.89
SEF1P34228 SLA1YBL007C 3735 nt3.22□□□□□ -1.89
SEF1P34228 TRX3YCR083W 384 nt3.22□□□□□ -1.89
SEF1P34228 FAD1YDL045C 921 nt3.22□□□□□ -1.89
SEF1P34228 YDL050CYDL050C 372 nt3.22□□□□□ -1.89
SEF1P34228 VMA10YHR039C-A 345 nt3.22□□□□□ -1.89
SEF1P34228 AIM19YIL087C 474 nt3.22□□□□□ -1.89
SEF1P34228 RNR2YJL026W 1200 nt3.22□□□□□ -1.89
SEF1P34228 YJL133C-AYJL133C-A 225 nt3.22□□□□□ -1.89
SEF1P34228 YJR037WYJR037W 384 nt3.22□□□□□ -1.89
SEF1P34228 YKT6YKL196C 603 nt3.22□□□□□ -1.89
SEF1P34228 PRM6YML047C 1059 nt3.22□□□□□ -1.89
SEF1P34228 YCL007CYCL007C 393 nt3.22□□□□□ -1.89
SEF1P34228 XRN1YGL173C 4587 nt3.22□□□□□ -1.89
SEF1P34228 FUS2YMR232W 2034 nt3.22□□□□□ -1.89
SEF1P34228 RED1YLR263W 2484 nt3.21□□□□□ -1.89
SEF1P34228 PEX5YDR244W 1839 nt3.21□□□□□ -1.89
SEF1P34228 RSM28YDR494W 1086 nt3.21□□□□□ -1.9
SEF1P34228 YGL074CYGL074C 327 nt3.21□□□□□ -1.9
SEF1P34228 AGE2YIL044C 897 nt3.21□□□□□ -1.9
SEF1P34228 AIM25YJR100C 984 nt3.21□□□□□ -1.9
SEF1P34228 TMA19YKL056C 504 nt3.21□□□□□ -1.9
SEF1P34228 RPL15AYLR029C 615 nt3.21□□□□□ -1.9
SEF1P34228 YOR073W-AYOR073W-A 234 nt3.21□□□□□ -1.9
SEF1P34228 YBR137WYBR137W 540 nt3.21□□□□□ -1.9
SEF1P34228 RRN6YBL014C 2685 nt3.21□□□□□ -1.9
SEF1P34228 MYO5YMR109W 3660 nt3.21□□□□□ -1.9
SEF1P34228 REF2YDR195W 1602 nt3.2□□□□□ -1.9
SEF1P34228 VAC14YLR386W 2643 nt3.2□□□□□ -1.9
SEF1P34228 YER046W-AYER046W-A 330 nt3.2□□□□□ -1.9
SEF1P34228 RSM18YER050C 417 nt3.2□□□□□ -1.9
SEF1P34228 YFR009W-AYFR009W-A 258 nt3.2□□□□□ -1.9
SEF1P34228 YIL141WYIL141W 390 nt3.2□□□□□ -1.9
SEF1P34228 YKR011CYKR011C 1062 nt3.2□□□□□ -1.9
SEF1P34228 YKE2YLR200W 345 nt3.2□□□□□ -1.9
SEF1P34228 RFC3YNL290W 1023 nt3.2□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 22.1 ms