Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PCDHA13Q9Y5I0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA13Q9Y5I0 PLK5-205ENST00000642079 1969 ntBASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 AC006128.1-201ENST00000624704 1661 ntBASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHA13Q9Y5I0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHA13Q9Y5I0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHA13Q9Y5I0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 SMUG1P1-201ENST00000590640 811 ntBASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHA13Q9Y5I0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 AL356441.2-201ENST00000443009 864 ntBASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDHA13Q9Y5I0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms