Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.39■□□□□ 0.53
CDH20Q9HBT6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH20Q9HBT6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.38■□□□□ 0.53
CDH20Q9HBT6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH20Q9HBT6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 NTF6G-201ENST00000591094 616 ntBASIC18.37■□□□□ 0.53
CDH20Q9HBT6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH20Q9HBT6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH20Q9HBT6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 FBXW4P1-201ENST00000426721 2239 ntBASIC18.35■□□□□ 0.53
CDH20Q9HBT6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH20Q9HBT6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms