Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCX3BQ9H321 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.12■□□□□ 0.81
VCX3BQ9H321 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCX3BQ9H321 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCX3BQ9H321 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCX3BQ9H321 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCX3BQ9H321 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.12■□□□□ 0.81
VCX3BQ9H321 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
VCX3BQ9H321 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.11■□□□□ 0.81
VCX3BQ9H321 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCX3BQ9H321 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCX3BQ9H321 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCX3BQ9H321 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VCX3BQ9H321 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VCX3BQ9H321 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCX3BQ9H321 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VCX3BQ9H321 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCX3BQ9H321 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCX3BQ9H321 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
VCX3BQ9H321 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCX3BQ9H321 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
VCX3BQ9H321 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCX3BQ9H321 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VCX3BQ9H321 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.09■□□□□ 0.81
VCX3BQ9H321 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCX3BQ9H321 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VCX3BQ9H321 AC087393.1-201ENST00000582896 145 ntBASIC20.09■□□□□ 0.81
VCX3BQ9H321 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.09■□□□□ 0.81
VCX3BQ9H321 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCX3BQ9H321 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VCX3BQ9H321 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
VCX3BQ9H321 FP325331.1-202ENST00000623531 1380 ntBASIC20.08■□□□□ 0.81
VCX3BQ9H321 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 C17orf82-201ENST00000623772 1530 ntBASIC20.08■□□□□ 0.81
VCX3BQ9H321 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.08■□□□□ 0.81
VCX3BQ9H321 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VCX3BQ9H321 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VCX3BQ9H321 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.08■□□□□ 0.8
VCX3BQ9H321 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VCX3BQ9H321 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.08■□□□□ 0.8
VCX3BQ9H321 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VCX3BQ9H321 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VCX3BQ9H321 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.08■□□□□ 0.8
VCX3BQ9H321 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
VCX3BQ9H321 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VCX3BQ9H321 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCX3BQ9H321 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VCX3BQ9H321 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
VCX3BQ9H321 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.07■□□□□ 0.8
VCX3BQ9H321 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
VCX3BQ9H321 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
VCX3BQ9H321 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCX3BQ9H321 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCX3BQ9H321 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.07■□□□□ 0.8
VCX3BQ9H321 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.07■□□□□ 0.8
VCX3BQ9H321 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms