Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.61■□□□□ 0.57
COMMD4Q9H0A8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 AL157384.1-201ENST00000445995 2473 ntBASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 SRD5A1P1-201ENST00000442297 786 ntBASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 AL049796.1-201ENST00000565336 1766 ntBASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD4Q9H0A8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 GUSBP5-201ENST00000418136 578 ntBASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
COMMD4Q9H0A8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD4Q9H0A8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD4Q9H0A8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD4Q9H0A8 AP004607.7-201ENST00000527152 1677 ntBASIC18.58■□□□□ 0.57
COMMD4Q9H0A8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD4Q9H0A8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 478.3 ms