Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 CDC5YMR001C 2118 nt3.74□□□□□ -1.81
RPN11P43588 RAD1YPL022W 3303 nt3.74□□□□□ -1.81
RPN11P43588 HBT1YDL223C 3141 nt3.74□□□□□ -1.81
RPN11P43588 YDL162CYDL162C 357 nt3.74□□□□□ -1.81
RPN11P43588 YDR355CYDR355C 303 nt3.74□□□□□ -1.81
RPN11P43588 PMI40YER003C 1290 nt3.74□□□□□ -1.81
RPN11P43588 PRE1YER012W 597 nt3.74□□□□□ -1.81
RPN11P43588 GPX1YKL026C 504 nt3.74□□□□□ -1.81
RPN11P43588 YLR271WYLR271W 825 nt3.74□□□□□ -1.81
RPN11P43588 NIS1YNL078W 1224 nt3.74□□□□□ -1.81
RPN11P43588 ATG3YNR007C 933 nt3.74□□□□□ -1.81
RPN11P43588 PHO88YBR106W 567 nt3.74□□□□□ -1.81
RPN11P43588 THR4YCR053W 1545 nt3.74□□□□□ -1.81
RPN11P43588 CTM1YHR109W 1758 nt3.74□□□□□ -1.81
RPN11P43588 EPO1YMR124W 2832 nt3.73□□□□□ -1.81
RPN11P43588 YDR203WYDR203W 318 nt3.73□□□□□ -1.81
RPN11P43588 GUK1YDR454C 564 nt3.73□□□□□ -1.81
RPN11P43588 STE2YFL026W 1296 nt3.73□□□□□ -1.81
RPN11P43588 GET1YGL020C 708 nt3.73□□□□□ -1.81
RPN11P43588 YGR190CYGR190C 366 nt3.73□□□□□ -1.81
RPN11P43588 ECM9YKR004C 1134 nt3.73□□□□□ -1.81
RPN11P43588 RPS30AYLR287C-A 192 nt3.73□□□□□ -1.81
RPN11P43588 YML053CYML053C 639 nt3.73□□□□□ -1.81
RPN11P43588 Q0017Q0017 162 nt3.73□□□□□ -1.81
RPN11P43588 PSF1YDR013W 627 nt3.72□□□□□ -1.81
RPN11P43588 YHI9YHR029C 885 nt3.72□□□□□ -1.81
RPN11P43588 YIL014C-AYIL014C-A 315 nt3.72□□□□□ -1.81
RPN11P43588 YIL024CYIL024C 570 nt3.72□□□□□ -1.81
RPN11P43588 YPL035CYPL035C 348 nt3.72□□□□□ -1.81
RPN11P43588 YBR063CYBR063C 1215 nt3.72□□□□□ -1.81
RPN11P43588 ULP1YPL020C 1866 nt3.72□□□□□ -1.81
RPN11P43588 YJR030CYJR030C 2238 nt3.72□□□□□ -1.81
RPN11P43588 BCS1YDR375C 1371 nt3.72□□□□□ -1.81
RPN11P43588 CIN8YEL061C 3003 nt3.71□□□□□ -1.81
RPN11P43588 CHS3YBR023C 3498 nt3.71□□□□□ -1.82
RPN11P43588 YAK1YJL141C 2424 nt3.71□□□□□ -1.82
RPN11P43588 AML1YGR001C 747 nt3.71□□□□□ -1.82
RPN11P43588 YIL161WYIL161W 708 nt3.71□□□□□ -1.82
RPN11P43588 ENT3YJR125C 1227 nt3.71□□□□□ -1.82
RPN11P43588 YKL091CYKL091C 933 nt3.71□□□□□ -1.82
RPN11P43588 YLR217WYLR217W 324 nt3.71□□□□□ -1.82
RPN11P43588 REC102YLR329W 795 nt3.71□□□□□ -1.82
RPN11P43588 PNG1YPL096W 1092 nt3.71□□□□□ -1.82
RPN11P43588 YPR078CYPR078C 1119 nt3.71□□□□□ -1.82
RPN11P43588 YPR153WYPR153W 423 nt3.71□□□□□ -1.82
RPN11P43588 YBR090CYBR090C 369 nt3.71□□□□□ -1.82
RPN11P43588 BUD5YCR038C 1929 nt3.71□□□□□ -1.82
RPN11P43588 RDS2YPL133C 1341 nt3.7□□□□□ -1.82
RPN11P43588 SEC27YGL137W 2670 nt3.7□□□□□ -1.82
RPN11P43588 STU2YLR045C 2667 nt3.7□□□□□ -1.82
RPN11P43588 REF2YDR195W 1602 nt3.7□□□□□ -1.82
RPN11P43588 MCP2YLR253W 1710 nt3.7□□□□□ -1.82
RPN11P43588 DPP1YDR284C 870 nt3.7□□□□□ -1.82
RPN11P43588 GPP2YER062C 753 nt3.7□□□□□ -1.82
RPN11P43588 LST7YGR057C 729 nt3.7□□□□□ -1.82
RPN11P43588 YHL002C-AYHL002C-A 489 nt3.7□□□□□ -1.82
RPN11P43588 YHR182C-AYHR182C-A 474 nt3.7□□□□□ -1.82
RPN11P43588 AIM19YIL087C 474 nt3.7□□□□□ -1.82
RPN11P43588 YAP5YIR018W 738 nt3.7□□□□□ -1.82
RPN11P43588 YMR310CYMR310C 954 nt3.7□□□□□ -1.82
RPN11P43588 SME1YOR159C 285 nt3.7□□□□□ -1.82
RPN11P43588 AVT7YIL088C 1473 nt3.7□□□□□ -1.82
RPN11P43588 ASI1YMR119W 1875 nt3.7□□□□□ -1.82
RPN11P43588 GCD2YGR083C 1956 nt3.7□□□□□ -1.82
RPN11P43588 ENP2YGR145W 2124 nt3.7□□□□□ -1.82
RPN11P43588 RNT1YMR239C 1416 nt3.7□□□□□ -1.82
RPN11P43588 RSC3YDR303C 2658 nt3.69□□□□□ -1.82
RPN11P43588 TRS85YDR108W 2097 nt3.69□□□□□ -1.82
RPN11P43588 YDL176WYDL176W 2127 nt3.69□□□□□ -1.82
RPN11P43588 YDR491CYDR491C 492 nt3.69□□□□□ -1.82
RPN11P43588 RGI1YER067W 486 nt3.69□□□□□ -1.82
RPN11P43588 YER158W-AYER158W-A 216 nt3.69□□□□□ -1.82
RPN11P43588 YFR009W-AYFR009W-A 258 nt3.69□□□□□ -1.82
RPN11P43588 YIP5YGL161C 933 nt3.69□□□□□ -1.82
RPN11P43588 tW(CCA)G1tW(CCA)G1 72 nt3.69□□□□□ -1.82
RPN11P43588 MMF1YIL051C 438 nt3.69□□□□□ -1.82
RPN11P43588 tW(CCA)G2tW(CCA)G2 72 nt3.69□□□□□ -1.82
RPN11P43588 tW(CCA)JtW(CCA)J 72 nt3.69□□□□□ -1.82
RPN11P43588 tW(CCA)KtW(CCA)K 72 nt3.69□□□□□ -1.82
RPN11P43588 tW(CCA)MtW(CCA)M 72 nt3.69□□□□□ -1.82
RPN11P43588 tW(CCA)PtW(CCA)P 72 nt3.69□□□□□ -1.82
RPN11P43588 YJR111CYJR111C 852 nt3.69□□□□□ -1.82
RPN11P43588 PAM18YLR008C 507 nt3.69□□□□□ -1.82
RPN11P43588 SMA2YML066C 1110 nt3.69□□□□□ -1.82
RPN11P43588 MCT1YOR221C 1083 nt3.69□□□□□ -1.82
RPN11P43588 NAT1YDL040C 2565 nt3.69□□□□□ -1.82
RPN11P43588 YOL019WYOL019W 1656 nt3.68□□□□□ -1.82
RPN11P43588 VPS41YDR080W 2979 nt3.68□□□□□ -1.82
RPN11P43588 SLN1YIL147C 3663 nt3.68□□□□□ -1.82
RPN11P43588 RPL13AYDL082W 600 nt3.68□□□□□ -1.82
RPN11P43588 ERG28YER044C 447 nt3.68□□□□□ -1.82
RPN11P43588 SCM4YGR049W 564 nt3.68□□□□□ -1.82
RPN11P43588 YGR115CYGR115C 780 nt3.68□□□□□ -1.82
RPN11P43588 AIM18YHR198C 966 nt3.68□□□□□ -1.82
RPN11P43588 YJL147CYJL147C 1149 nt3.68□□□□□ -1.82
RPN11P43588 YAP7YOL028C 738 nt3.68□□□□□ -1.82
RPN11P43588 HNT3YOR258W 654 nt3.68□□□□□ -1.82
RPN11P43588 FRM2YCL026C-A 582 nt3.68□□□□□ -1.82
RPN11P43588 YPS6YIR039C 1614 nt3.68□□□□□ -1.82
RPN11P43588 URK1YNR012W 1506 nt3.68□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms