Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP4-1Q9BYQ7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 AL355472.2-201ENST00000422958 438 ntBASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 AC073648.6-201ENST00000641589 218 ntBASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP4-1Q9BYQ7 KRT17P1-201ENST00000399211 1546 ntBASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 AL034346.1-201ENST00000568244 1277 ntBASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP4-1Q9BYQ7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
KRTAP4-1Q9BYQ7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
KRTAP4-1Q9BYQ7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP4-1Q9BYQ7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms