Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ODF4Q2M2E3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 OR2I1P-207ENST00000453522 948 ntBASIC18.69■□□□□ 0.58
ODF4Q2M2E3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ODF4Q2M2E3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 AC010141.3-201ENST00000456659 717 ntBASIC18.68■□□□□ 0.58
ODF4Q2M2E3 AC068587.7-201ENST00000641602 218 ntBASIC18.68■□□□□ 0.58
ODF4Q2M2E3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 AC073130.3-201ENST00000624389 2278 ntBASIC18.68■□□□□ 0.58
ODF4Q2M2E3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ODF4Q2M2E3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.67■□□□□ 0.58
ODF4Q2M2E3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.67■□□□□ 0.58
ODF4Q2M2E3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 AL512631.2-201ENST00000604634 923 ntBASIC18.66■□□□□ 0.58
ODF4Q2M2E3 AC092171.4-201ENST00000609130 632 ntBASIC18.66■□□□□ 0.58
ODF4Q2M2E3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ODF4Q2M2E3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.65■□□□□ 0.58
ODF4Q2M2E3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ODF4Q2M2E3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms