Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RHBDD3Q9Y3P4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RHBDD3Q9Y3P4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.58■□□□□ 0.57
RHBDD3Q9Y3P4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 AC024257.2-201ENST00000549699 147 ntBASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.58■□□□□ 0.56
RHBDD3Q9Y3P4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 OR7E47P-201ENST00000546390 1422 ntBASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 AC026471.6-201ENST00000622954 1905 ntBASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
RHBDD3Q9Y3P4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 FEM1AP4-201ENST00000443167 1987 ntBASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 AC096631.2-201ENST00000436136 790 ntBASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 AP005435.1-201ENST00000529293 1178 ntBASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RHBDD3Q9Y3P4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 AC135279.3-201ENST00000610945 1311 ntBASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 OXCT2P1-201ENST00000447263 1535 ntBASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.55■□□□□ 0.56
RHBDD3Q9Y3P4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RHBDD3Q9Y3P4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.53■□□□□ 0.56
RHBDD3Q9Y3P4 AF106564.1-201ENST00000607058 2553 ntBASIC18.53■□□□□ 0.56
RHBDD3Q9Y3P4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
RHBDD3Q9Y3P4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDD3Q9Y3P4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RHBDD3Q9Y3P4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDD3Q9Y3P4 BX842568.3-201ENST00000418104 571 ntBASIC18.53■□□□□ 0.56
RHBDD3Q9Y3P4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RHBDD3Q9Y3P4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.53■□□□□ 0.56
RHBDD3Q9Y3P4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms