Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 AL162412.1-201ENST00000567129 965 ntBASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM43Q96BQ3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 ABCB10P4-201ENST00000566803 2184 ntBASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM43Q96BQ3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 MIR1224-201ENST00000408193 85 ntBASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 AC008403.3-201ENST00000598924 454 ntBASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 AP006587.3-201ENST00000525742 1516 ntBASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
TRIM43Q96BQ3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 OR7E47P-201ENST00000546390 1422 ntBASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 RBM17P2-201ENST00000616397 1405 ntBASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 AC120498.10-201ENST00000621827 505 ntBASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM43Q96BQ3 LINC01960-201ENST00000563759 1884 ntBASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 MIR4497-201ENST00000583208 89 ntBASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM43Q96BQ3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM43Q96BQ3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
TRIM43Q96BQ3 LINC00526-201ENST00000581067 1875 ntBASIC23.33■■□□□ 1.33
TRIM43Q96BQ3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.33■■□□□ 1.33
TRIM43Q96BQ3 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.33■■□□□ 1.33
TRIM43Q96BQ3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.33■■□□□ 1.33
TRIM43Q96BQ3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.33■■□□□ 1.33
TRIM43Q96BQ3 AC008175.2-201ENST00000612840 297 ntBASIC23.33■■□□□ 1.33
TRIM43Q96BQ3 AC073912.3-201ENST00000624414 853 ntBASIC23.33■■□□□ 1.33
TRIM43Q96BQ3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM43Q96BQ3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM43Q96BQ3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM43Q96BQ3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
TRIM43Q96BQ3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 FAM210CP-201ENST00000445714 574 ntBASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 AL034346.1-201ENST00000568244 1277 ntBASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM43Q96BQ3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43Q96BQ3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIM43Q96BQ3 AC211429.1-201ENST00000415277 523 ntBASIC23.31■■□□□ 1.32
TRIM43Q96BQ3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43Q96BQ3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43Q96BQ3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms