Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 DET1-205ENST00000558413 583 ntTSL 4 BASIC27.17■■□□□ 1.94
COL15A1P39059 ITM2C-210ENST00000620962 501 ntBASIC27.17■■□□□ 1.94
COL15A1P39059 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.17■■□□□ 1.94
COL15A1P39059 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL15A1P39059 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL15A1P39059 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL15A1P39059 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL15A1P39059 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
COL15A1P39059 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.16■■□□□ 1.94
COL15A1P39059 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL15A1P39059 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC27.16■■□□□ 1.94
COL15A1P39059 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.16■■□□□ 1.94
COL15A1P39059 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL15A1P39059 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC27.16■■□□□ 1.94
COL15A1P39059 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC27.16■■□□□ 1.94
COL15A1P39059 AC016405.3-201ENST00000607710 860 ntBASIC27.16■■□□□ 1.94
COL15A1P39059 OR10C1-204ENST00000622521 1039 ntBASIC27.16■■□□□ 1.94
COL15A1P39059 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.16■■□□□ 1.94
COL15A1P39059 CASK-201ENST00000378154 2494 ntTSL 5 BASIC27.16■■□□□ 1.94
COL15A1P39059 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
COL15A1P39059 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL15A1P39059 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.15■■□□□ 1.94
COL15A1P39059 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC27.15■■□□□ 1.94
COL15A1P39059 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL15A1P39059 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC27.15■■□□□ 1.94
COL15A1P39059 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC27.15■■□□□ 1.94
COL15A1P39059 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
COL15A1P39059 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
COL15A1P39059 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
COL15A1P39059 AC092118.2-201ENST00000613495 667 ntBASIC27.15■■□□□ 1.94
COL15A1P39059 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.15■■□□□ 1.94
COL15A1P39059 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL15A1P39059 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL15A1P39059 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL15A1P39059 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL15A1P39059 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC27.14■■□□□ 1.94
COL15A1P39059 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL15A1P39059 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
COL15A1P39059 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
COL15A1P39059 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL15A1P39059 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC27.13■■□□□ 1.93
COL15A1P39059 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL15A1P39059 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
COL15A1P39059 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL15A1P39059 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL15A1P39059 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL15A1P39059 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.12■■□□□ 1.93
COL15A1P39059 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
COL15A1P39059 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
COL15A1P39059 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL15A1P39059 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL15A1P39059 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL15A1P39059 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
COL15A1P39059 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL15A1P39059 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL15A1P39059 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL15A1P39059 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
COL15A1P39059 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
COL15A1P39059 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC27.11■■□□□ 1.93
COL15A1P39059 AC083880.1-201ENST00000608266 535 ntBASIC27.11■■□□□ 1.93
COL15A1P39059 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL15A1P39059 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
COL15A1P39059 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL15A1P39059 PRORSD1P-201ENST00000295112 541 ntBASIC27.1■■□□□ 1.93
COL15A1P39059 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
COL15A1P39059 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL15A1P39059 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.1■■□□□ 1.93
COL15A1P39059 AC069236.1-201ENST00000604339 616 ntBASIC27.1■■□□□ 1.93
COL15A1P39059 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.1■■□□□ 1.93
COL15A1P39059 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL15A1P39059 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL15A1P39059 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL15A1P39059 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.1■■□□□ 1.93
COL15A1P39059 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC27.1■■□□□ 1.93
COL15A1P39059 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC27.09■■□□□ 1.93
COL15A1P39059 AL512625.2-201ENST00000417533 625 ntBASIC27.09■■□□□ 1.93
COL15A1P39059 RARRES2P4-201ENST00000514074 484 ntBASIC27.09■■□□□ 1.93
COL15A1P39059 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC27.09■■□□□ 1.93
COL15A1P39059 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL15A1P39059 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL15A1P39059 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.09■■□□□ 1.93
COL15A1P39059 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL15A1P39059 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.09■■□□□ 1.93
COL15A1P39059 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC27.09■■□□□ 1.93
COL15A1P39059 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.09■■□□□ 1.93
COL15A1P39059 AC137767.1-201ENST00000602918 1920 ntBASIC27.08■■□□□ 1.93
COL15A1P39059 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL15A1P39059 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL15A1P39059 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL15A1P39059 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.08■■□□□ 1.93
COL15A1P39059 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
COL15A1P39059 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms