Protein–RNA interactions for Protein: Q8N878

FRMD1, FERM domain-containing protein 1, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1Q8N878 AP006587.3-201ENST00000525742 1516 ntBASIC21.33■■□□□ 1
FRMD1Q8N878 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FRMD1Q8N878 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FRMD1Q8N878 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.33■■□□□ 1
FRMD1Q8N878 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.32■■□□□ 1
FRMD1Q8N878 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.32■■□□□ 1
FRMD1Q8N878 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FRMD1Q8N878 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
FRMD1Q8N878 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FRMD1Q8N878 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.32■■□□□ 1
FRMD1Q8N878 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.32■■□□□ 1
FRMD1Q8N878 POU5F1P3-201ENST00000428824 1078 ntBASIC21.32■■□□□ 1
FRMD1Q8N878 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.32■■□□□ 1
FRMD1Q8N878 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.32■■□□□ 1
FRMD1Q8N878 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.32■■□□□ 1
FRMD1Q8N878 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.32■■□□□ 1
FRMD1Q8N878 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
FRMD1Q8N878 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
FRMD1Q8N878 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
FRMD1Q8N878 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.31■■□□□ 1
FRMD1Q8N878 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FRMD1Q8N878 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
FRMD1Q8N878 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.31■■□□□ 1
FRMD1Q8N878 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.31■■□□□ 1
FRMD1Q8N878 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
FRMD1Q8N878 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
FRMD1Q8N878 MIR4758-201ENST00000577688 71 ntBASIC21.31■■□□□ 1
FRMD1Q8N878 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.31■■□□□ 1
FRMD1Q8N878 AC053503.5-201ENST00000601508 636 ntBASIC21.31■■□□□ 1
FRMD1Q8N878 AC016405.3-201ENST00000607710 860 ntBASIC21.31■■□□□ 1
FRMD1Q8N878 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
FRMD1Q8N878 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FRMD1Q8N878 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FRMD1Q8N878 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FRMD1Q8N878 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
FRMD1Q8N878 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.3■■□□□ 1
FRMD1Q8N878 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FRMD1Q8N878 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FRMD1Q8N878 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.3■■□□□ 1
FRMD1Q8N878 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FRMD1Q8N878 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.3■■□□□ 1
FRMD1Q8N878 AC093827.2-201ENST00000512654 315 ntBASIC21.3■■□□□ 1
FRMD1Q8N878 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.3■■□□□ 1
FRMD1Q8N878 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
FRMD1Q8N878 SLC7A5P1-201ENST00000568957 537 ntBASIC21.3■■□□□ 1
FRMD1Q8N878 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FRMD1Q8N878 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FRMD1Q8N878 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.3■■□□□ 1
FRMD1Q8N878 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FRMD1Q8N878 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.29■■□□□ 1
FRMD1Q8N878 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FRMD1Q8N878 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.29■■□□□ 1
FRMD1Q8N878 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.29■■□□□ 1
FRMD1Q8N878 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FRMD1Q8N878 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
FRMD1Q8N878 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.29■■□□□ 1
FRMD1Q8N878 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
FRMD1Q8N878 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.29■■□□□ 1
FRMD1Q8N878 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FRMD1Q8N878 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
FRMD1Q8N878 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FRMD1Q8N878 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FRMD1Q8N878 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.28■■□□□ 1
FRMD1Q8N878 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.28■■□□□ 1
FRMD1Q8N878 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.28■■□□□ 1
FRMD1Q8N878 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.28■■□□□ 1
FRMD1Q8N878 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FRMD1Q8N878 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.28■■□□□ 1
FRMD1Q8N878 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
FRMD1Q8N878 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
FRMD1Q8N878 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
FRMD1Q8N878 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.27■■□□□ 1
FRMD1Q8N878 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FRMD1Q8N878 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
FRMD1Q8N878 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.27■■□□□ 1
FRMD1Q8N878 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.27■■□□□ 1
FRMD1Q8N878 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.27■■□□□ 1
FRMD1Q8N878 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
FRMD1Q8N878 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FRMD1Q8N878 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FRMD1Q8N878 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FRMD1Q8N878 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FRMD1Q8N878 PRORSD1P-201ENST00000295112 541 ntBASIC21.26■□□□□ 0.99
FRMD1Q8N878 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 ITM2C-210ENST00000620962 501 ntBASIC21.26■□□□□ 0.99
FRMD1Q8N878 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FRMD1Q8N878 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FRMD1Q8N878 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.26■□□□□ 0.99
FRMD1Q8N878 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FRMD1Q8N878 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FRMD1Q8N878 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
FRMD1Q8N878 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms