Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 RAD55YDR076W 1221 nt4.34□□□□□ -1.71
SSM4P40318 YGL177WYGL177W 348 nt4.34□□□□□ -1.71
SSM4P40318 RSM25YIL093C 795 nt4.34□□□□□ -1.71
SSM4P40318 MBB1YJL199C 327 nt4.34□□□□□ -1.71
SSM4P40318 FYV6YNL133C 522 nt4.34□□□□□ -1.71
SSM4P40318 YLR152CYLR152C 1731 nt4.34□□□□□ -1.71
SSM4P40318 DSN1YIR010W 1731 nt4.33□□□□□ -1.72
SSM4P40318 MNN1YER001W 2289 nt4.33□□□□□ -1.72
SSM4P40318 IES3YLR052W 753 nt4.33□□□□□ -1.72
SSM4P40318 NEJ1YLR265C 1029 nt4.33□□□□□ -1.72
SSM4P40318 YML053CYML053C 639 nt4.33□□□□□ -1.72
SSM4P40318 YMR087WYMR087W 855 nt4.33□□□□□ -1.72
SSM4P40318 ATG34YOL083W 1239 nt4.33□□□□□ -1.72
SSM4P40318 XRS2YDR369C 2565 nt4.33□□□□□ -1.72
SSM4P40318 JIP5YPR169W 1479 nt4.33□□□□□ -1.72
SSM4P40318 YRM1YOR172W 2361 nt4.32□□□□□ -1.72
SSM4P40318 GSC2YGR032W 5688 nt4.32□□□□□ -1.72
SSM4P40318 IZH1YDR492W 951 nt4.32□□□□□ -1.72
SSM4P40318 HTD2YHR067W 843 nt4.32□□□□□ -1.72
SSM4P40318 VPS25YJR102C 609 nt4.32□□□□□ -1.72
SSM4P40318 SOD1YJR104C 465 nt4.32□□□□□ -1.72
SSM4P40318 RPC37YKR025W 849 nt4.32□□□□□ -1.72
SSM4P40318 SIL1YOL031C 1266 nt4.32□□□□□ -1.72
SSM4P40318 CAT5YOR125C 702 nt4.32□□□□□ -1.72
SSM4P40318 TAF3YPL011C 1062 nt4.32□□□□□ -1.72
SSM4P40318 CCL1YPR025C 1182 nt4.32□□□□□ -1.72
SSM4P40318 APA1YCL050C 966 nt4.32□□□□□ -1.72
SSM4P40318 RSE1YML049C 4086 nt4.32□□□□□ -1.72
SSM4P40318 DSL1YNL258C 2265 nt4.32□□□□□ -1.72
SSM4P40318 CSR2YPR030W 3366 nt4.32□□□□□ -1.72
SSM4P40318 YGR270C-AYGR270C-A 219 nt4.31□□□□□ -1.72
SSM4P40318 tR(UCU)Q1tR(UCU)Q1 73 nt4.31□□□□□ -1.72
SSM4P40318 RPL8BYLL045C 771 nt4.31□□□□□ -1.72
SSM4P40318 YLR365WYLR365W 333 nt4.31□□□□□ -1.72
SSM4P40318 REX4YOL080C 870 nt4.31□□□□□ -1.72
SSM4P40318 YBR242WYBR242W 717 nt4.31□□□□□ -1.72
SSM4P40318 AEP3YPL005W 1821 nt4.31□□□□□ -1.72
SSM4P40318 SDS23YGL056C 1584 nt4.31□□□□□ -1.72
SSM4P40318 HCM1YCR065W 1695 nt4.31□□□□□ -1.72
SSM4P40318 JJJ1YNL227C 1773 nt4.31□□□□□ -1.72
SSM4P40318 OSH2YDL019C 3852 nt4.31□□□□□ -1.72
SSM4P40318 TLC1TLC1 1301 nt4.31□□□□□ -1.72
SSM4P40318 CIT1YNR001C 1440 nt4.3□□□□□ -1.72
SSM4P40318 EPO1YMR124W 2832 nt4.3□□□□□ -1.72
SSM4P40318 PIB1YDR313C 861 nt4.3□□□□□ -1.72
SSM4P40318 YGR026WYGR026W 837 nt4.3□□□□□ -1.72
SSM4P40318 YIL156W-AYIL156W-A 402 nt4.3□□□□□ -1.72
SSM4P40318 BOS1YLR078C 735 nt4.3□□□□□ -1.72
SSM4P40318 YLR169WYLR169W 354 nt4.3□□□□□ -1.72
SSM4P40318 YPT53YNL093W 663 nt4.3□□□□□ -1.72
SSM4P40318 CTM1YHR109W 1758 nt4.3□□□□□ -1.72
SSM4P40318 RSC3YDR303C 2658 nt4.3□□□□□ -1.72
SSM4P40318 URA2YJL130C 6645 nt4.29□□□□□ -1.72
SSM4P40318 PRP11YDL043C 801 nt4.29□□□□□ -1.72
SSM4P40318 CUP1-1YHR053C 186 nt4.29□□□□□ -1.72
SSM4P40318 CUP1-2YHR055C 186 nt4.29□□□□□ -1.72
SSM4P40318 YIR021W-AYIR021W-A 213 nt4.29□□□□□ -1.72
SSM4P40318 PET130YJL023C 1044 nt4.29□□□□□ -1.72
SSM4P40318 AIM22YJL046W 1230 nt4.29□□□□□ -1.72
SSM4P40318 SDO1YLR022C 753 nt4.29□□□□□ -1.72
SSM4P40318 COA4YLR218C 453 nt4.29□□□□□ -1.72
SSM4P40318 SSO2YMR183C 888 nt4.29□□□□□ -1.72
SSM4P40318 RHO5YNL180C 996 nt4.29□□□□□ -1.72
SSM4P40318 RPN2YIL075C 2838 nt4.29□□□□□ -1.72
SSM4P40318 SPA2YLL021W 4401 nt4.28□□□□□ -1.72
SSM4P40318 UBP12YJL197W 3765 nt4.28□□□□□ -1.72
SSM4P40318 BSC2YDR275W 708 nt4.28□□□□□ -1.72
SSM4P40318 NKP1YDR383C 717 nt4.28□□□□□ -1.72
SSM4P40318 MEI4YER044C-A 1227 nt4.28□□□□□ -1.72
SSM4P40318 SPT15YER148W 723 nt4.28□□□□□ -1.72
SSM4P40318 YGL218WYGL218W 651 nt4.28□□□□□ -1.72
SSM4P40318 YPT35YHR105W 645 nt4.28□□□□□ -1.72
SSM4P40318 PFS1YHR185C 714 nt4.28□□□□□ -1.72
SSM4P40318 DAL2YIR029W 1032 nt4.28□□□□□ -1.72
SSM4P40318 YJR128WYJR128W 360 nt4.28□□□□□ -1.72
SSM4P40318 UFE1YOR075W 1041 nt4.28□□□□□ -1.72
SSM4P40318 MRPL27YBR282W 441 nt4.28□□□□□ -1.72
SSM4P40318 VPS45YGL095C 1734 nt4.28□□□□□ -1.72
SSM4P40318 SLN1YIL147C 3663 nt4.28□□□□□ -1.72
SSM4P40318 SEC59YMR013C 1560 nt4.28□□□□□ -1.72
SSM4P40318 YBR238CYBR238C 2196 nt4.28□□□□□ -1.72
SSM4P40318 YDL157CYDL157C 357 nt4.27□□□□□ -1.73
SSM4P40318 APA2YDR530C 978 nt4.27□□□□□ -1.73
SSM4P40318 YFL051CYFL051C 483 nt4.27□□□□□ -1.73
SSM4P40318 YAR075WYAR075W 474 nt4.27□□□□□ -1.73
SSM4P40318 YLR339CYLR339C 552 nt4.27□□□□□ -1.73
SSM4P40318 DUG3YNL191W 1074 nt4.27□□□□□ -1.73
SSM4P40318 IRC13YOR235W 315 nt4.27□□□□□ -1.73
SSM4P40318 CMD1YBR109C 444 nt4.27□□□□□ -1.73
SSM4P40318 YCL022CYCL022C 516 nt4.27□□□□□ -1.73
SSM4P40318 FRM2YCL026C-A 582 nt4.27□□□□□ -1.73
SSM4P40318 IOC2YLR095C 2439 nt4.27□□□□□ -1.73
SSM4P40318 BCK2YER167W 2556 nt4.27□□□□□ -1.73
SSM4P40318 YOR365CYOR365C 2112 nt4.27□□□□□ -1.73
SSM4P40318 PBS2YJL128C 2007 nt4.27□□□□□ -1.73
SSM4P40318 NHP10YDL002C 612 nt4.26□□□□□ -1.73
SSM4P40318 SUR1YPL057C 1149 nt4.26□□□□□ -1.73
SSM4P40318 YPR078CYPR078C 1119 nt4.26□□□□□ -1.73
SSM4P40318 GEM1YAL048C 1989 nt4.26□□□□□ -1.73
SSM4P40318 YGL188CYGL188C 174 nt4.25□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 166.5 ms