Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD5Q8TDI0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD5Q8TDI0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHD5Q8TDI0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD5Q8TDI0 AC004854.2-201ENST00000608450 1441 ntBASIC21.8■■□□□ 1.08
CHD5Q8TDI0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD5Q8TDI0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CHD5Q8TDI0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD5Q8TDI0 C11orf96-202ENST00000528572 1834 ntBASIC21.8■■□□□ 1.08
CHD5Q8TDI0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD5Q8TDI0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.79■■□□□ 1.08
CHD5Q8TDI0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 AC003102.1-202ENST00000563394 1796 ntBASIC21.78■■□□□ 1.08
CHD5Q8TDI0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD5Q8TDI0 AC104187.1-201ENST00000607510 612 ntBASIC21.78■■□□□ 1.08
CHD5Q8TDI0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD5Q8TDI0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.77■■□□□ 1.08
CHD5Q8TDI0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CHD5Q8TDI0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD5Q8TDI0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD5Q8TDI0 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.77■■□□□ 1.08
CHD5Q8TDI0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD5Q8TDI0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD5Q8TDI0 EP400NL-214ENST00000641289 2402 ntBASIC21.76■■□□□ 1.07
CHD5Q8TDI0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 AC138907.5-202ENST00000569484 235 ntBASIC21.76■■□□□ 1.07
CHD5Q8TDI0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.76■■□□□ 1.07
CHD5Q8TDI0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD5Q8TDI0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 IKBKGP1-201ENST00000612193 1073 ntBASIC21.74■■□□□ 1.07
CHD5Q8TDI0 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.74■■□□□ 1.07
CHD5Q8TDI0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD5Q8TDI0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms