Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST4Q8NFU0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST4Q8NFU0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST4Q8NFU0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST4Q8NFU0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST4Q8NFU0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST4Q8NFU0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BEST4Q8NFU0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.39■□□□□ 0.54
BEST4Q8NFU0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 ATP5G2P3-201ENST00000429083 425 ntBASIC18.39■□□□□ 0.53
BEST4Q8NFU0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BEST4Q8NFU0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 AC004987.1-201ENST00000428627 508 ntBASIC18.38■□□□□ 0.53
BEST4Q8NFU0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST4Q8NFU0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST4Q8NFU0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.36■□□□□ 0.53
BEST4Q8NFU0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 AC005703.6-201ENST00000623265 1329 ntBASIC18.36■□□□□ 0.53
BEST4Q8NFU0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
BEST4Q8NFU0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST4Q8NFU0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST4Q8NFU0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST4Q8NFU0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
BEST4Q8NFU0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms