Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 NOP6YDL213C 678 nt4.42□□□□□ -1.7
SSM4P40318 PUG1YER185W 912 nt4.42□□□□□ -1.7
SSM4P40318 YHI9YHR029C 885 nt4.42□□□□□ -1.7
SSM4P40318 RSM26YJR101W 801 nt4.42□□□□□ -1.7
SSM4P40318 YKL162CYKL162C 1209 nt4.42□□□□□ -1.7
SSM4P40318 RPF2YKR081C 1035 nt4.42□□□□□ -1.7
SSM4P40318 YML047W-AYML047W-A 366 nt4.42□□□□□ -1.7
SSM4P40318 ALO1YML086C 1581 nt4.42□□□□□ -1.7
SSM4P40318 YOR186WYOR186W 435 nt4.42□□□□□ -1.7
SSM4P40318 DSF2YBR007C 2211 nt4.41□□□□□ -1.7
SSM4P40318 PRP22YER013W 3438 nt4.41□□□□□ -1.7
SSM4P40318 DOG2YHR043C 741 nt4.41□□□□□ -1.7
SSM4P40318 ALB1YJL122W 528 nt4.41□□□□□ -1.7
SSM4P40318 GSP1YLR293C 660 nt4.41□□□□□ -1.7
SSM4P40318 YLR428CYLR428C 345 nt4.41□□□□□ -1.7
SSM4P40318 RPC34YNR003C 954 nt4.41□□□□□ -1.7
SSM4P40318 YDL180WYDL180W 1644 nt4.4□□□□□ -1.7
SSM4P40318 MIC60YKR016W 1623 nt4.4□□□□□ -1.7
SSM4P40318 ATG21YPL100W 1491 nt4.4□□□□□ -1.71
SSM4P40318 PRP3YDR473C 1410 nt4.4□□□□□ -1.71
SSM4P40318 HEH2YDR458C 1992 nt4.4□□□□□ -1.71
SSM4P40318 MDN1YLR106C 14733 nt4.4□□□□□ -1.71
SSM4P40318 MRH1YDR033W 963 nt4.4□□□□□ -1.71
SSM4P40318 SPI1YER150W 447 nt4.4□□□□□ -1.71
SSM4P40318 RPL15AYLR029C 615 nt4.4□□□□□ -1.71
SSM4P40318 YML094C-AYML094C-A 402 nt4.4□□□□□ -1.71
SSM4P40318 YSF3YNL138W-A 258 nt4.4□□□□□ -1.71
SSM4P40318 YNR071CYNR071C 1029 nt4.4□□□□□ -1.71
SSM4P40318 YBR013CYBR013C 390 nt4.4□□□□□ -1.71
SSM4P40318 YBR141W-AYBR141W-A 96 nt4.4□□□□□ -1.71
SSM4P40318 ICS2YBR157C 768 nt4.4□□□□□ -1.71
SSM4P40318 VPS27YNR006W 1869 nt4.4□□□□□ -1.71
SSM4P40318 MDM10YAL010C 1482 nt4.39□□□□□ -1.71
SSM4P40318 NUF2YOL069W 1356 nt4.39□□□□□ -1.71
SSM4P40318 YFR032C-BYFR032C-B 264 nt4.39□□□□□ -1.71
SSM4P40318 YGL006W-AYGL006W-A 111 nt4.39□□□□□ -1.71
SSM4P40318 SPT4YGR063C 309 nt4.39□□□□□ -1.71
SSM4P40318 FIP1YJR093C 984 nt4.39□□□□□ -1.71
SSM4P40318 YLR297WYLR297W 390 nt4.39□□□□□ -1.71
SSM4P40318 RIF2YLR453C 1188 nt4.39□□□□□ -1.71
SSM4P40318 IST1YNL265C 897 nt4.39□□□□□ -1.71
SSM4P40318 SYC1YOR179C 567 nt4.39□□□□□ -1.71
SSM4P40318 RRP7YCL031C 894 nt4.39□□□□□ -1.71
SSM4P40318 POL1YNL102W 4407 nt4.39□□□□□ -1.71
SSM4P40318 IMD4YML056C 1575 nt4.39□□□□□ -1.71
SSM4P40318 TPD3YAL016W 1908 nt4.38□□□□□ -1.71
SSM4P40318 TRM12YML005W 1389 nt4.38□□□□□ -1.71
SSM4P40318 YDR034C-CYDR034C-C 1317 nt4.38□□□□□ -1.71
SSM4P40318 YLR410W-AYLR410W-A 1317 nt4.38□□□□□ -1.71
SSM4P40318 DBP10YDL031W 2988 nt4.38□□□□□ -1.71
SSM4P40318 PPH3YDR075W 927 nt4.38□□□□□ -1.71
SSM4P40318 GRX3YDR098C 858 nt4.38□□□□□ -1.71
SSM4P40318 PIR1YKL164C 1026 nt4.38□□□□□ -1.71
SSM4P40318 APC9YLR102C 798 nt4.38□□□□□ -1.71
SSM4P40318 YLR156WYLR156W 345 nt4.38□□□□□ -1.71
SSM4P40318 YLR159WYLR159W 345 nt4.38□□□□□ -1.71
SSM4P40318 YLR161WYLR161W 345 nt4.38□□□□□ -1.71
SSM4P40318 SWC7YLR385C 399 nt4.38□□□□□ -1.71
SSM4P40318 MED11YMR112C 396 nt4.38□□□□□ -1.71
SSM4P40318 YNL035CYNL035C 1170 nt4.38□□□□□ -1.71
SSM4P40318 YBR096WYBR096W 693 nt4.38□□□□□ -1.71
SSM4P40318 PLM2YDR501W 1566 nt4.38□□□□□ -1.71
SSM4P40318 AUS1YOR011W 4185 nt4.38□□□□□ -1.71
SSM4P40318 SEC27YGL137W 2670 nt4.38□□□□□ -1.71
SSM4P40318 RNA14YMR061W 2034 nt4.37□□□□□ -1.71
SSM4P40318 CHS2YBR038W 2892 nt4.37□□□□□ -1.71
SSM4P40318 MGA1YGR249W 1371 nt4.37□□□□□ -1.71
SSM4P40318 YKL222CYKL222C 2118 nt4.37□□□□□ -1.71
SSM4P40318 APN2YBL019W 1563 nt4.37□□□□□ -1.71
SSM4P40318 YJR037WYJR037W 384 nt4.37□□□□□ -1.71
SSM4P40318 YKL033W-AYKL033W-A 711 nt4.37□□□□□ -1.71
SSM4P40318 RUF21RUF21 707 nt4.37□□□□□ -1.71
SSM4P40318 SSU72YNL222W 621 nt4.37□□□□□ -1.71
SSM4P40318 PFK27YOL136C 1194 nt4.37□□□□□ -1.71
SSM4P40318 YBR292CYBR292C 372 nt4.37□□□□□ -1.71
SSM4P40318 MNR2YKL064W 2910 nt4.37□□□□□ -1.71
SSM4P40318 GRS2YPR081C 1857 nt4.36□□□□□ -1.71
SSM4P40318 IZH3YLR023C 1632 nt4.36□□□□□ -1.71
SSM4P40318 PAM1YDR251W 2493 nt4.36□□□□□ -1.71
SSM4P40318 YLR446WYLR446W 1302 nt4.36□□□□□ -1.71
SSM4P40318 YDR355CYDR355C 303 nt4.36□□□□□ -1.71
SSM4P40318 PET54YGR222W 882 nt4.36□□□□□ -1.71
SSM4P40318 YLR285C-AYLR285C-A 171 nt4.36□□□□□ -1.71
SSM4P40318 DCP1YOL149W 696 nt4.36□□□□□ -1.71
SSM4P40318 CAF20YOR276W 486 nt4.36□□□□□ -1.71
SSM4P40318 PEX34YCL056C 435 nt4.36□□□□□ -1.71
SSM4P40318 VPS17YOR132W 1656 nt4.36□□□□□ -1.71
SSM4P40318 CET1YPL228W 1650 nt4.36□□□□□ -1.71
SSM4P40318 RTG3YBL103C 1461 nt4.35□□□□□ -1.71
SSM4P40318 HMF1YER057C 390 nt4.35□□□□□ -1.71
SSM4P40318 PRP18YGR006W 756 nt4.35□□□□□ -1.71
SSM4P40318 YIR023C-AYIR023C-A 324 nt4.35□□□□□ -1.71
SSM4P40318 RPS11BYBR048W 471 nt4.35□□□□□ -1.71
SSM4P40318 HPA2YPR193C 471 nt4.35□□□□□ -1.71
SSM4P40318 ENA2YDR039C 3276 nt4.35□□□□□ -1.71
SSM4P40318 ENA1YDR040C 3276 nt4.35□□□□□ -1.71
SSM4P40318 BUD5YCR038C 1929 nt4.35□□□□□ -1.71
SSM4P40318 YME2YMR302C 2553 nt4.35□□□□□ -1.71
SSM4P40318 VAS1YGR094W 3315 nt4.34□□□□□ -1.71
SSM4P40318 YNR066CYNR066C 1311 nt4.34□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 58.7 ms