Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.27■■□□□ 1
CAPNS1P04632 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.27■■□□□ 1
CAPNS1P04632 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPNS1P04632 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CAPNS1P04632 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPNS1P04632 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.27■■□□□ 1
CAPNS1P04632 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.27■■□□□ 1
CAPNS1P04632 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.27■■□□□ 1
CAPNS1P04632 AC093827.2-201ENST00000512654 315 ntBASIC21.27■■□□□ 1
CAPNS1P04632 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.27■■□□□ 1
CAPNS1P04632 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CAPNS1P04632 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CAPNS1P04632 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CAPNS1P04632 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.27■□□□□ 0.99
CAPNS1P04632 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.27■□□□□ 0.99
CAPNS1P04632 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.27■□□□□ 0.99
CAPNS1P04632 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPNS1P04632 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPNS1P04632 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPNS1P04632 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.26■□□□□ 0.99
CAPNS1P04632 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.26■□□□□ 0.99
CAPNS1P04632 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.26■□□□□ 0.99
CAPNS1P04632 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.26■□□□□ 0.99
CAPNS1P04632 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.26■□□□□ 0.99
CAPNS1P04632 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.26■□□□□ 0.99
CAPNS1P04632 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPNS1P04632 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CAPNS1P04632 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.26■□□□□ 0.99
CAPNS1P04632 AL161729.1-201ENST00000604104 1402 ntBASIC21.26■□□□□ 0.99
CAPNS1P04632 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CAPNS1P04632 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPNS1P04632 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CAPNS1P04632 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.26■□□□□ 0.99
CAPNS1P04632 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CAPNS1P04632 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPNS1P04632 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPNS1P04632 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.25■□□□□ 0.99
CAPNS1P04632 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPNS1P04632 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.25■□□□□ 0.99
CAPNS1P04632 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPNS1P04632 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.25■□□□□ 0.99
CAPNS1P04632 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CAPNS1P04632 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CAPNS1P04632 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CAPNS1P04632 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.24■□□□□ 0.99
CAPNS1P04632 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPNS1P04632 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.24■□□□□ 0.99
CAPNS1P04632 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CAPNS1P04632 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CAPNS1P04632 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.24■□□□□ 0.99
CAPNS1P04632 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CAPNS1P04632 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.24■□□□□ 0.99
CAPNS1P04632 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPNS1P04632 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CAPNS1P04632 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPNS1P04632 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CAPNS1P04632 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CAPNS1P04632 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CAPNS1P04632 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPNS1P04632 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPNS1P04632 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CAPNS1P04632 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPNS1P04632 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.23■□□□□ 0.99
CAPNS1P04632 MIR663A-201ENST00000385250 93 ntBASIC21.23■□□□□ 0.99
CAPNS1P04632 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPNS1P04632 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
CAPNS1P04632 MIR4651-201ENST00000582622 73 ntBASIC21.23■□□□□ 0.99
CAPNS1P04632 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPNS1P04632 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CAPNS1P04632 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CAPNS1P04632 AC139530.1-201ENST00000575312 1977 ntBASIC21.23■□□□□ 0.99
CAPNS1P04632 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CAPNS1P04632 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPNS1P04632 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.22■□□□□ 0.99
CAPNS1P04632 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.22■□□□□ 0.99
CAPNS1P04632 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPNS1P04632 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPNS1P04632 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.22■□□□□ 0.99
CAPNS1P04632 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CAPNS1P04632 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.22■□□□□ 0.99
CAPNS1P04632 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPNS1P04632 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPNS1P04632 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.22■□□□□ 0.99
CAPNS1P04632 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CAPNS1P04632 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CAPNS1P04632 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CAPNS1P04632 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.22■□□□□ 0.99
CAPNS1P04632 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CAPNS1P04632 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPNS1P04632 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.21■□□□□ 0.99
CAPNS1P04632 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPNS1P04632 AC004854.2-201ENST00000608450 1441 ntBASIC21.21■□□□□ 0.99
CAPNS1P04632 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CAPNS1P04632 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CAPNS1P04632 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPNS1P04632 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CAPNS1P04632 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.21■□□□□ 0.99
CAPNS1P04632 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.21■□□□□ 0.99
CAPNS1P04632 AC010525.1-201ENST00000585559 441 ntBASIC21.21■□□□□ 0.99
CAPNS1P04632 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms