Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 MCT1YOR221C 1083 nt3.92□□□□□ -1.78
TY2A-FP0CX61 PIN3YPR154W 648 nt3.92□□□□□ -1.78
TY2A-FP0CX61 YGR117CYGR117C 1431 nt3.92□□□□□ -1.78
TY2A-FP0CX61 SEN1YLR430W 6696 nt3.92□□□□□ -1.78
TY2A-FP0CX61 NAT1YDL040C 2565 nt3.92□□□□□ -1.78
TY2A-FP0CX61 EMP47YFL048C 1338 nt3.92□□□□□ -1.78
TY2A-FP0CX61 RDS2YPL133C 1341 nt3.92□□□□□ -1.78
TY2A-FP0CX61 IZH3YLR023C 1632 nt3.92□□□□□ -1.78
TY2A-FP0CX61 RSC58YLR033W 1509 nt3.91□□□□□ -1.78
TY2A-FP0CX61 KIN2YLR096W 3444 nt3.91□□□□□ -1.78
TY2A-FP0CX61 OAF3YKR064W 2592 nt3.91□□□□□ -1.78
TY2A-FP0CX61 snR83snR83 306 nt3.91□□□□□ -1.78
TY2A-FP0CX61 DPP1YDR284C 870 nt3.91□□□□□ -1.78
TY2A-FP0CX61 YHR054CYHR054C 1065 nt3.91□□□□□ -1.78
TY2A-FP0CX61 YNL181WYNL181W 1224 nt3.91□□□□□ -1.78
TY2A-FP0CX61 RAS1YOR101W 930 nt3.91□□□□□ -1.78
TY2A-FP0CX61 GRX7YBR014C 612 nt3.91□□□□□ -1.78
TY2A-FP0CX61 SAS5YOR213C 747 nt3.91□□□□□ -1.78
TY2A-FP0CX61 PBP2YBR233W 1242 nt3.91□□□□□ -1.78
TY2A-FP0CX61 SKG6YHR149C 2205 nt3.91□□□□□ -1.78
TY2A-FP0CX61 POL1YNL102W 4407 nt3.91□□□□□ -1.78
TY2A-FP0CX61 CDC5YMR001C 2118 nt3.91□□□□□ -1.78
TY2A-FP0CX61 YGL176CYGL176C 1665 nt3.9□□□□□ -1.78
TY2A-FP0CX61 NUP133YKR082W 3474 nt3.9□□□□□ -1.78
TY2A-FP0CX61 NHX1YDR456W 1902 nt3.9□□□□□ -1.78
TY2A-FP0CX61 TMA17YDL110C 453 nt3.9□□□□□ -1.79
TY2A-FP0CX61 AI3Q0060 1248 nt3.9□□□□□ -1.79
TY2A-FP0CX61 AIM7YDR063W 450 nt3.9□□□□□ -1.79
TY2A-FP0CX61 GUK1YDR454C 564 nt3.9□□□□□ -1.79
TY2A-FP0CX61 WBP1YEL002C 1293 nt3.9□□□□□ -1.79
TY2A-FP0CX61 AML1YGR001C 747 nt3.9□□□□□ -1.79
TY2A-FP0CX61 COX18YGR062C 951 nt3.9□□□□□ -1.79
TY2A-FP0CX61 THP2YHR167W 786 nt3.9□□□□□ -1.79
TY2A-FP0CX61 ERG29YMR134W 714 nt3.9□□□□□ -1.79
TY2A-FP0CX61 ECM13YBL043W 774 nt3.9□□□□□ -1.79
TY2A-FP0CX61 YOR131CYOR131C 657 nt3.9□□□□□ -1.79
TY2A-FP0CX61 GCD2YGR083C 1956 nt3.9□□□□□ -1.79
TY2A-FP0CX61 APM3YBR288C 1452 nt3.9□□□□□ -1.79
TY2A-FP0CX61 PGS1YCL004W 1566 nt3.89□□□□□ -1.79
TY2A-FP0CX61 BCK2YER167W 2556 nt3.89□□□□□ -1.79
TY2A-FP0CX61 ELO2YCR034W 1044 nt3.89□□□□□ -1.79
TY2A-FP0CX61 YDR246W-AYDR246W-A 201 nt3.89□□□□□ -1.79
TY2A-FP0CX61 RPS18AYDR450W 441 nt3.89□□□□□ -1.79
TY2A-FP0CX61 YEA4YEL004W 1029 nt3.89□□□□□ -1.79
TY2A-FP0CX61 PEF1YGR058W 1008 nt3.89□□□□□ -1.79
TY2A-FP0CX61 SOL4YGR248W 768 nt3.89□□□□□ -1.79
TY2A-FP0CX61 YIL161WYIL161W 708 nt3.89□□□□□ -1.79
TY2A-FP0CX61 IRC18YJL037W 675 nt3.89□□□□□ -1.79
TY2A-FP0CX61 PCD1YLR151C 1023 nt3.89□□□□□ -1.79
TY2A-FP0CX61 MIC27YNL100W 705 nt3.89□□□□□ -1.79
TY2A-FP0CX61 YOR082CYOR082C 342 nt3.89□□□□□ -1.79
TY2A-FP0CX61 FDH1YOR388C 1131 nt3.89□□□□□ -1.79
TY2A-FP0CX61 MTL1YGR023W 1656 nt3.89□□□□□ -1.79
TY2A-FP0CX61 YPS7YDR349C 1791 nt3.89□□□□□ -1.79
TY2A-FP0CX61 GPM2YDL021W 936 nt3.88□□□□□ -1.79
TY2A-FP0CX61 RPL13AYDL082W 600 nt3.88□□□□□ -1.79
TY2A-FP0CX61 tL(UAG)JtL(UAG)J 82 nt3.88□□□□□ -1.79
TY2A-FP0CX61 tL(UAG)L1tL(UAG)L1 82 nt3.88□□□□□ -1.79
TY2A-FP0CX61 tL(UAG)L2tL(UAG)L2 82 nt3.88□□□□□ -1.79
TY2A-FP0CX61 YPT6YLR262C 648 nt3.88□□□□□ -1.79
TY2A-FP0CX61 RDN58-1RDN58-1 158 nt3.88□□□□□ -1.79
TY2A-FP0CX61 RDN58-2RDN58-2 158 nt3.88□□□□□ -1.79
TY2A-FP0CX61 SIW14YNL032W 846 nt3.88□□□□□ -1.79
TY2A-FP0CX61 YPT53YNL093W 663 nt3.88□□□□□ -1.79
TY2A-FP0CX61 RPS19AYOL121C 435 nt3.88□□□□□ -1.79
TY2A-FP0CX61 SPN1YPR133C 1233 nt3.88□□□□□ -1.79
TY2A-FP0CX61 YBR287WYBR287W 1284 nt3.88□□□□□ -1.79
TY2A-FP0CX61 NUP85YJR042W 2235 nt3.88□□□□□ -1.79
TY2A-FP0CX61 YOL019WYOL019W 1656 nt3.87□□□□□ -1.79
TY2A-FP0CX61 YOL075CYOL075C 3885 nt3.87□□□□□ -1.79
TY2A-FP0CX61 TFB2YPL122C 1542 nt3.87□□□□□ -1.79
TY2A-FP0CX61 SPC19YDR201W 498 nt3.87□□□□□ -1.79
TY2A-FP0CX61 PMI40YER003C 1290 nt3.87□□□□□ -1.79
TY2A-FP0CX61 GPP2YER062C 753 nt3.87□□□□□ -1.79
TY2A-FP0CX61 YGR064WYGR064W 369 nt3.87□□□□□ -1.79
TY2A-FP0CX61 RPL14AYKL006W 417 nt3.87□□□□□ -1.79
TY2A-FP0CX61 ISA1YLL027W 753 nt3.87□□□□□ -1.79
TY2A-FP0CX61 MRPL3YMR024W 1173 nt3.87□□□□□ -1.79
TY2A-FP0CX61 PEX15YOL044W 1152 nt3.87□□□□□ -1.79
TY2A-FP0CX61 YOR238WYOR238W 912 nt3.87□□□□□ -1.79
TY2A-FP0CX61 FRM2YCL026C-A 582 nt3.87□□□□□ -1.79
TY2A-FP0CX61 YDR261W-AYDR261W-A 1317 nt3.87□□□□□ -1.79
TY2A-FP0CX61 IMH1YLR309C 2736 nt3.86□□□□□ -1.79
TY2A-FP0CX61 YDL228CYDL228C 642 nt3.86□□□□□ -1.79
TY2A-FP0CX61 MSW1YDR268W 1140 nt3.86□□□□□ -1.79
TY2A-FP0CX61 YDR340WYDR340W 303 nt3.86□□□□□ -1.79
TY2A-FP0CX61 YGL188CYGL188C 174 nt3.86□□□□□ -1.79
TY2A-FP0CX61 EPT1YHR123W 1176 nt3.86□□□□□ -1.79
TY2A-FP0CX61 YJL032WYJL032W 315 nt3.86□□□□□ -1.79
TY2A-FP0CX61 ARO80YDR421W 2853 nt3.86□□□□□ -1.79
TY2A-FP0CX61 PMC1YGL006W 3522 nt3.86□□□□□ -1.79
TY2A-FP0CX61 TPA1YER049W 1935 nt3.85□□□□□ -1.79
TY2A-FP0CX61 TSR1YDL060W 2367 nt3.85□□□□□ -1.79
TY2A-FP0CX61 LOS1YKL205W 3303 nt3.85□□□□□ -1.79
TY2A-FP0CX61 SEC27YGL137W 2670 nt3.85□□□□□ -1.79
TY2A-FP0CX61 YOL153CYOL153C 1746 nt3.85□□□□□ -1.79
TY2A-FP0CX61 YDR491CYDR491C 492 nt3.85□□□□□ -1.79
TY2A-FP0CX61 MIG2YGL209W 1149 nt3.85□□□□□ -1.79
TY2A-FP0CX61 PTI1YGR156W 1278 nt3.85□□□□□ -1.79
TY2A-FP0CX61 FOL2YGR267C 732 nt3.85□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 38.6 ms