Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSDP07339 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CTSDP07339 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.8■□□□□ 0.44
CTSDP07339 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CTSDP07339 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CTSDP07339 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.8■□□□□ 0.44
CTSDP07339 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.8■□□□□ 0.44
CTSDP07339 OXCT2P1-201ENST00000447263 1535 ntBASIC17.8■□□□□ 0.44
CTSDP07339 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSDP07339 AC009102.2-201ENST00000606772 1639 ntBASIC17.8■□□□□ 0.44
CTSDP07339 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CTSDP07339 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSDP07339 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.79■□□□□ 0.44
CTSDP07339 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTSDP07339 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.79■□□□□ 0.44
CTSDP07339 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTSDP07339 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.79■□□□□ 0.44
CTSDP07339 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.79■□□□□ 0.44
CTSDP07339 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTSDP07339 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
CTSDP07339 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTSDP07339 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.79■□□□□ 0.44
CTSDP07339 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.79■□□□□ 0.44
CTSDP07339 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTSDP07339 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSDP07339 AC092667.1-201ENST00000434301 2586 ntBASIC17.79■□□□□ 0.44
CTSDP07339 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CTSDP07339 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CTSDP07339 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSDP07339 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSDP07339 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CTSDP07339 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.78■□□□□ 0.44
CTSDP07339 AC079089.2-201ENST00000531211 1277 ntBASIC17.78■□□□□ 0.44
CTSDP07339 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSDP07339 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.78■□□□□ 0.44
CTSDP07339 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.78■□□□□ 0.44
CTSDP07339 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSDP07339 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTSDP07339 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSDP07339 C17orf82-201ENST00000623772 1530 ntBASIC17.77■□□□□ 0.44
CTSDP07339 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSDP07339 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CTSDP07339 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSDP07339 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CTSDP07339 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSDP07339 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.77■□□□□ 0.44
CTSDP07339 AC026471.6-201ENST00000622954 1905 ntBASIC17.77■□□□□ 0.44
CTSDP07339 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CTSDP07339 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSDP07339 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.77■□□□□ 0.44
CTSDP07339 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.77■□□□□ 0.44
CTSDP07339 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CTSDP07339 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTSDP07339 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.77■□□□□ 0.43
CTSDP07339 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTSDP07339 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CTSDP07339 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CTSDP07339 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTSDP07339 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTSDP07339 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
CTSDP07339 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.76■□□□□ 0.43
CTSDP07339 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CTSDP07339 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSDP07339 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTSDP07339 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 220.6 ms