Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 SLC47A1P1-202ENST00000449666 945 ntBASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 AC010141.3-201ENST00000456659 717 ntBASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 AC079089.2-201ENST00000531211 1277 ntBASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV1A0A0A0MS02 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 OR7E47P-201ENST00000546390 1422 ntBASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 MIR4767-201ENST00000582827 78 ntBASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV1A0A0A0MS02 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 AC135279.3-201ENST00000610945 1311 ntBASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 AC096631.2-201ENST00000436136 790 ntBASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 AC024257.2-201ENST00000549699 147 ntBASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV1A0A0A0MS02 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRGV1A0A0A0MS02 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 FBXW4P1-201ENST00000426721 2239 ntBASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.52■□□□□ 0.08
TRGV1A0A0A0MS02 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms