Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 DUSP8P5-201ENST00000422884 1815 ntBASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEFF1Q8IYR6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMEFF1Q8IYR6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEFF1Q8IYR6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEFF1Q8IYR6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEFF1Q8IYR6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEFF1Q8IYR6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.48■■□□□ 1.03
TMEFF1Q8IYR6 AF201337.1-201ENST00000520239 748 ntBASIC21.48■■□□□ 1.03
TMEFF1Q8IYR6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 AC069152.1-201ENST00000438030 544 ntBASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 AC105036.2-201ENST00000569468 176 ntBASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEFF1Q8IYR6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 CNN2P6-201ENST00000439038 900 ntBASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 FAM201B-201ENST00000458407 597 ntBASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 AC055733.4-201ENST00000638462 1354 ntBASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TMEFF1Q8IYR6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
TMEFF1Q8IYR6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 AC133041.1-202ENST00000642053 222 ntBASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
TMEFF1Q8IYR6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 AC098934.4-201ENST00000564127 592 ntBASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.44■■□□□ 1.02
TMEFF1Q8IYR6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEFF1Q8IYR6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEFF1Q8IYR6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.43■■□□□ 1.02
TMEFF1Q8IYR6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.43■■□□□ 1.02
TMEFF1Q8IYR6 AC010536.3-201ENST00000620306 533 ntBASIC21.43■■□□□ 1.02
TMEFF1Q8IYR6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
TMEFF1Q8IYR6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEFF1Q8IYR6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.43■■□□□ 1.02
TMEFF1Q8IYR6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.43■■□□□ 1.02
TMEFF1Q8IYR6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 AC133552.2-202ENST00000575694 574 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms