Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 TERF1P5-201ENST00000477545 1207 ntBASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 AC138907.5-202ENST00000569484 235 ntBASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM43Q96BQ3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TRIM43Q96BQ3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM43Q96BQ3 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM43Q96BQ3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM43Q96BQ3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TRIM43Q96BQ3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM43Q96BQ3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TRIM43Q96BQ3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.75■■□□□ 1.39
TRIM43Q96BQ3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 AC093787.1-201ENST00000450396 207 ntBASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 AC083880.1-201ENST00000608266 535 ntBASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 AC092118.2-201ENST00000613495 667 ntBASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM43Q96BQ3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM43Q96BQ3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM43Q96BQ3 ESRRAP1-201ENST00000400596 1257 ntBASIC23.73■■□□□ 1.39
TRIM43Q96BQ3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM43Q96BQ3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.73■■□□□ 1.39
TRIM43Q96BQ3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM43Q96BQ3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM43Q96BQ3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM43Q96BQ3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 AC138932.3-201ENST00000567634 1902 ntBASIC23.72■■□□□ 1.39
TRIM43Q96BQ3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 LINC00543-201ENST00000567234 1845 ntBASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 AL158047.1-201ENST00000445918 881 ntBASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM43Q96BQ3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM43Q96BQ3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM43Q96BQ3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 RPS2P4-201ENST00000476944 856 ntBASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 OR10C1-204ENST00000622521 1039 ntBASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM43Q96BQ3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms