Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP4-4Q9BYR3 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC5.44□□□□□ -1.54
KRTAP4-4Q9BYR3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.44□□□□□ -1.54
KRTAP4-4Q9BYR3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC5.44□□□□□ -1.54
KRTAP4-4Q9BYR3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC5.44□□□□□ -1.54
KRTAP4-4Q9BYR3 AL391001.1-201ENST00000602747 715 ntBASIC5.44□□□□□ -1.54
KRTAP4-4Q9BYR3 AC009452.1-201ENST00000640823 606 ntBASIC5.44□□□□□ -1.54
KRTAP4-4Q9BYR3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
KRTAP4-4Q9BYR3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP4-4Q9BYR3 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP4-4Q9BYR3 MTATP6P31-201ENST00000406985 692 ntBASIC5.43□□□□□ -1.54
KRTAP4-4Q9BYR3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP4-4Q9BYR3 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP4-4Q9BYR3 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP4-4Q9BYR3 AP000842.4-201ENST00000638781 748 ntBASIC5.43□□□□□ -1.54
KRTAP4-4Q9BYR3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-4Q9BYR3 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-4Q9BYR3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-4Q9BYR3 AC091917.2-201ENST00000505002 744 ntBASIC5.42□□□□□ -1.54
KRTAP4-4Q9BYR3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC5.42□□□□□ -1.54
KRTAP4-4Q9BYR3 AC025165.5-201ENST00000602802 578 ntBASIC5.42□□□□□ -1.54
KRTAP4-4Q9BYR3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
KRTAP4-4Q9BYR3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-4Q9BYR3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC5.41□□□□□ -1.54
KRTAP4-4Q9BYR3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-4Q9BYR3 AL035696.2-201ENST00000407941 709 ntBASIC5.41□□□□□ -1.54
KRTAP4-4Q9BYR3 STK33P1-201ENST00000423835 1218 ntBASIC5.41□□□□□ -1.54
KRTAP4-4Q9BYR3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.41□□□□□ -1.54
KRTAP4-4Q9BYR3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
KRTAP4-4Q9BYR3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-4Q9BYR3 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-4Q9BYR3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC5.4□□□□□ -1.55
KRTAP4-4Q9BYR3 HLA-F-220ENST00000434407 884 ntBASIC5.39□□□□□ -1.55
KRTAP4-4Q9BYR3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP4-4Q9BYR3 PRELID3BP7-201ENST00000503606 469 ntBASIC5.39□□□□□ -1.55
KRTAP4-4Q9BYR3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP4-4Q9BYR3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP4-4Q9BYR3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 ZNRF2P1-201ENST00000441407 443 ntBASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP4-4Q9BYR3 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 MTCO2P3-201ENST00000442543 421 ntBASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 AC084782.3-201ENST00000612282 578 ntBASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRTAP4-4Q9BYR3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 AL136981.1-204ENST00000425090 461 ntTSL 3 BASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 AC006077.2-201ENST00000623591 457 ntBASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 AC097520.1-201ENST00000624435 385 ntBASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 AL034417.3-201ENST00000641100 1043 ntBASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC5.36□□□□□ -1.55
KRTAP4-4Q9BYR3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.35□□□□□ -1.55
KRTAP4-4Q9BYR3 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-4Q9BYR3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-4Q9BYR3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-4Q9BYR3 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP4-4Q9BYR3 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP4-4Q9BYR3 AL445222.1-201ENST00000607259 628 ntBASIC5.35□□□□□ -1.55
KRTAP4-4Q9BYR3 AL157392.4-201ENST00000609756 345 ntBASIC5.35□□□□□ -1.55
KRTAP4-4Q9BYR3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-4Q9BYR3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-4Q9BYR3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-4Q9BYR3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-4Q9BYR3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.34□□□□□ -1.55
KRTAP4-4Q9BYR3 AC083964.1-201ENST00000607549 630 ntBASIC5.34□□□□□ -1.55
KRTAP4-4Q9BYR3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.34□□□□□ -1.55
KRTAP4-4Q9BYR3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-4Q9BYR3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-4Q9BYR3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP4-4Q9BYR3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-4Q9BYR3 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-4Q9BYR3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC5.33□□□□□ -1.56
KRTAP4-4Q9BYR3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.33□□□□□ -1.56
KRTAP4-4Q9BYR3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC5.33□□□□□ -1.56
KRTAP4-4Q9BYR3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KRTAP4-4Q9BYR3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 HAUS1P1-201ENST00000505275 832 ntBASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 MTND4LP18-201ENST00000526864 291 ntBASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 AC104072.1-201ENST00000568817 668 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms