Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 MAE1YKL029C 2010 nt8.34□□□□□ -1.07
HRD1Q08109 RRT5YFR032C 870 nt8.32□□□□□ -1.08
HRD1Q08109 SAM35YHR083W 990 nt8.3□□□□□ -1.08
HRD1Q08109 ESBP6YNL125C 2022 nt8.3□□□□□ -1.08
HRD1Q08109 ALD4YOR374W 1560 nt8.3□□□□□ -1.08
HRD1Q08109 GAP1YKR039W 1809 nt8.29□□□□□ -1.08
HRD1Q08109 NDI1YML120C 1542 nt8.29□□□□□ -1.08
HRD1Q08109 YDR094WYDR094W 336 nt8.28□□□□□ -1.08
HRD1Q08109 UGA4YDL210W 1716 nt8.27□□□□□ -1.09
HRD1Q08109 ILV2YMR108W 2064 nt8.27□□□□□ -1.09
HRD1Q08109 PRM5YIL117C 957 nt8.27□□□□□ -1.09
HRD1Q08109 PRE6YOL038W 765 nt8.27□□□□□ -1.09
HRD1Q08109 RFC1YOR217W 2586 nt8.26□□□□□ -1.09
HRD1Q08109 PRO1YDR300C 1287 nt8.26□□□□□ -1.09
HRD1Q08109 SHB17YKR043C 816 nt8.26□□□□□ -1.09
HRD1Q08109 YML089CYML089C 369 nt8.25□□□□□ -1.09
HRD1Q08109 UTR1YJR049C 1593 nt8.25□□□□□ -1.09
HRD1Q08109 RIM8YGL045W 1629 nt8.25□□□□□ -1.09
HRD1Q08109 ATG15YCR068W 1563 nt8.24□□□□□ -1.09
HRD1Q08109 HIF1YLL022C 1158 nt8.24□□□□□ -1.09
HRD1Q08109 POM34YLR018C 900 nt8.24□□□□□ -1.09
HRD1Q08109 YDR010CYDR010C 333 nt8.22□□□□□ -1.09
HRD1Q08109 GTB1YDR221W 2109 nt8.22□□□□□ -1.09
HRD1Q08109 UBX6YJL048C 1191 nt8.22□□□□□ -1.09
HRD1Q08109 SHH4YLR164W 507 nt8.22□□□□□ -1.09
HRD1Q08109 BSP1YPR171W 1731 nt8.22□□□□□ -1.09
HRD1Q08109 YHL019W-AYHL019W-A 594 nt8.21□□□□□ -1.1
HRD1Q08109 MIR1YJR077C 936 nt8.21□□□□□ -1.1
HRD1Q08109 RET2YFR051C 1641 nt8.21□□□□□ -1.1
HRD1Q08109 URA8YJR103W 1737 nt8.2□□□□□ -1.1
HRD1Q08109 YGL114WYGL114W 2178 nt8.19□□□□□ -1.1
HRD1Q08109 UBA4YHR111W 1323 nt8.19□□□□□ -1.1
HRD1Q08109 PHO89YBR296C 1725 nt8.17□□□□□ -1.1
HRD1Q08109 SFA1YDL168W 1161 nt8.17□□□□□ -1.1
HRD1Q08109 TOM6YOR045W 186 nt8.17□□□□□ -1.1
HRD1Q08109 DTR1YBR180W 1719 nt8.17□□□□□ -1.1
HRD1Q08109 THI74YDR438W 1113 nt8.16□□□□□ -1.1
HRD1Q08109 PAU16YKL224C 372 nt8.16□□□□□ -1.1
HRD1Q08109 YSR3YKR053C 1215 nt8.15□□□□□ -1.1
HRD1Q08109 YCR087WYCR087W 516 nt8.14□□□□□ -1.11
HRD1Q08109 ZRT3YKL175W 1512 nt8.13□□□□□ -1.11
HRD1Q08109 ACO2YJL200C 2370 nt8.13□□□□□ -1.11
HRD1Q08109 MRP20YDR405W 792 nt8.13□□□□□ -1.11
HRD1Q08109 NAT4YMR069W 858 nt8.13□□□□□ -1.11
HRD1Q08109 INA1YLR413W 2028 nt8.12□□□□□ -1.11
HRD1Q08109 GAL2YLR081W 1725 nt8.12□□□□□ -1.11
HRD1Q08109 DIF1YLR437C 402 nt8.11□□□□□ -1.11
HRD1Q08109 SPT20YOL148C 1815 nt8.1□□□□□ -1.11
HRD1Q08109 PEX2YJL210W 816 nt8.1□□□□□ -1.11
HRD1Q08109 CLB6YGR109C 1143 nt8.08□□□□□ -1.12
HRD1Q08109 TIF6YPR016C 738 nt8.08□□□□□ -1.12
HRD1Q08109 MSF1YPR047W 1410 nt8.08□□□□□ -1.12
HRD1Q08109 HXT1YHR094C 1713 nt8.08□□□□□ -1.12
HRD1Q08109 MET28YIR017C 564 nt8.07□□□□□ -1.12
HRD1Q08109 COQ2YNR041C 1119 nt8.07□□□□□ -1.12
HRD1Q08109 HIP1YGR191W 1812 nt8.07□□□□□ -1.12
HRD1Q08109 UTH1YKR042W 1098 nt8.04□□□□□ -1.12
HRD1Q08109 XYL2YLR070C 1071 nt8.04□□□□□ -1.12
HRD1Q08109 YAR028WYAR028W 705 nt8.04□□□□□ -1.12
HRD1Q08109 DBP1YPL119C 1854 nt8.04□□□□□ -1.12
HRD1Q08109 NRT1YOR071C 1797 nt8.03□□□□□ -1.12
HRD1Q08109 RPL4BYDR012W 1089 nt8.03□□□□□ -1.12
HRD1Q08109 YGL034CYGL034C 366 nt8.03□□□□□ -1.12
HRD1Q08109 RPL4AYBR031W 1089 nt8.03□□□□□ -1.12
HRD1Q08109 THI72YOR192C 1800 nt8.03□□□□□ -1.12
HRD1Q08109 TOK1YJL093C 2076 nt8.02□□□□□ -1.13
HRD1Q08109 SED1YDR077W 1017 nt8.01□□□□□ -1.13
HRD1Q08109 LIP1YMR298W 453 nt8.01□□□□□ -1.13
HRD1Q08109 AIM45YPR004C 1035 nt8.01□□□□□ -1.13
HRD1Q08109 FIT3YOR383C 615 nt7.99□□□□□ -1.13
HRD1Q08109 RPC82YPR190C 1965 nt7.99□□□□□ -1.13
HRD1Q08109 SHY1YGR112W 1170 nt7.97□□□□□ -1.13
HRD1Q08109 YJL067WYJL067W 351 nt7.97□□□□□ -1.13
HRD1Q08109 ALP1YNL270C 1722 nt7.97□□□□□ -1.13
HRD1Q08109 SAM1YLR180W 1149 nt7.96□□□□□ -1.14
HRD1Q08109 MTG2YHR168W 1557 nt7.96□□□□□ -1.14
HRD1Q08109 AKR2YOR034C 2250 nt7.95□□□□□ -1.14
HRD1Q08109 YER190C-AYER190C-A 576 nt7.94□□□□□ -1.14
HRD1Q08109 YGR296C-AYGR296C-A 576 nt7.94□□□□□ -1.14
HRD1Q08109 YML133W-AYML133W-A 576 nt7.94□□□□□ -1.14
HRD1Q08109 YNL339W-AYNL339W-A 576 nt7.94□□□□□ -1.14
HRD1Q08109 YPL283W-AYPL283W-A 576 nt7.94□□□□□ -1.14
HRD1Q08109 YBL086CYBL086C 1401 nt7.94□□□□□ -1.14
HRD1Q08109 RPS14BYJL191W 417 nt7.92□□□□□ -1.14
HRD1Q08109 RBG1YAL036C 1110 nt7.92□□□□□ -1.14
HRD1Q08109 URA6YKL024C 615 nt7.91□□□□□ -1.14
HRD1Q08109 TOA2YKL058W 369 nt7.91□□□□□ -1.14
HRD1Q08109 HEM14YER014W 1620 nt7.9□□□□□ -1.14
HRD1Q08109 MUP1YGR055W 1725 nt7.89□□□□□ -1.15
HRD1Q08109 BRR1YPR057W 1026 nt7.89□□□□□ -1.15
HRD1Q08109 LEU9YOR108W 1815 nt7.88□□□□□ -1.15
HRD1Q08109 CWC15YDR163W 528 nt7.87□□□□□ -1.15
HRD1Q08109 ZTA1YBR046C 1005 nt7.87□□□□□ -1.15
HRD1Q08109 TSC10YBR265W 963 nt7.87□□□□□ -1.15
HRD1Q08109 PET8YNL003C 855 nt7.86□□□□□ -1.15
HRD1Q08109 HXK1YFR053C 1458 nt7.85□□□□□ -1.15
HRD1Q08109 YHL008CYHL008C 1884 nt7.84□□□□□ -1.15
HRD1Q08109 SDH5YOL071W 489 nt7.84□□□□□ -1.15
HRD1Q08109 OYE3YPL171C 1203 nt7.84□□□□□ -1.15
HRD1Q08109 YIL100C-AYIL100C-A 339 nt7.83□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 54.4 ms