Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 YNL115CYNL115C 1935 nt8.37□□□□□ -1.07
SSU72P53538 URA8YJR103W 1737 nt8.37□□□□□ -1.07
SSU72P53538 YGL114WYGL114W 2178 nt8.37□□□□□ -1.07
SSU72P53538 YCR102CYCR102C 1107 nt8.35□□□□□ -1.07
SSU72P53538 VPS75YNL246W 795 nt8.35□□□□□ -1.07
SSU72P53538 NIT1YIL164C 600 nt8.33□□□□□ -1.08
SSU72P53538 TOK1YJL093C 2076 nt8.33□□□□□ -1.08
SSU72P53538 SGT2YOR007C 1041 nt8.32□□□□□ -1.08
SSU72P53538 SPT20YOL148C 1815 nt8.3□□□□□ -1.08
SSU72P53538 ACO2YJL200C 2370 nt8.29□□□□□ -1.08
SSU72P53538 YFR018CYFR018C 1092 nt8.29□□□□□ -1.08
SSU72P53538 PAU7YAR020C 168 nt8.28□□□□□ -1.08
SSU72P53538 SNF1YDR477W 1902 nt8.27□□□□□ -1.09
SSU72P53538 YFL066CYFL066C 1179 nt8.25□□□□□ -1.09
SSU72P53538 NBP35YGL091C 987 nt8.25□□□□□ -1.09
SSU72P53538 THI72YOR192C 1800 nt8.24□□□□□ -1.09
SSU72P53538 RRT5YFR032C 870 nt8.22□□□□□ -1.09
SSU72P53538 ARP6YLR085C 1317 nt8.22□□□□□ -1.09
SSU72P53538 MCM5YLR274W 2328 nt8.2□□□□□ -1.1
SSU72P53538 YDR094WYDR094W 336 nt8.19□□□□□ -1.1
SSU72P53538 LSC2YGR244C 1284 nt8.19□□□□□ -1.1
SSU72P53538 TIR3YIL011W 810 nt8.19□□□□□ -1.1
SSU72P53538 NRT1YOR071C 1797 nt8.19□□□□□ -1.1
SSU72P53538 PLB1YMR008C 1995 nt8.17□□□□□ -1.1
SSU72P53538 FRA1YLL029W 2250 nt8.15□□□□□ -1.1
SSU72P53538 MAS1YLR163C 1389 nt8.15□□□□□ -1.1
SSU72P53538 SAM35YHR083W 990 nt8.15□□□□□ -1.1
SSU72P53538 PRE6YOL038W 765 nt8.13□□□□□ -1.11
SSU72P53538 SHB17YKR043C 816 nt8.11□□□□□ -1.11
SSU72P53538 YML089CYML089C 369 nt8.11□□□□□ -1.11
SSU72P53538 GAP1YKR039W 1809 nt8.1□□□□□ -1.11
SSU72P53538 ALD4YOR374W 1560 nt8.1□□□□□ -1.11
SSU72P53538 PRO1YDR300C 1287 nt8.07□□□□□ -1.12
SSU72P53538 MIR1YJR077C 936 nt8.07□□□□□ -1.12
SSU72P53538 NSG2YNL156C 900 nt8.07□□□□□ -1.12
SSU72P53538 RET2YFR051C 1641 nt8.07□□□□□ -1.12
SSU72P53538 ATG15YCR068W 1563 nt8.06□□□□□ -1.12
SSU72P53538 YDR010CYDR010C 333 nt8.06□□□□□ -1.12
SSU72P53538 PRM5YIL117C 957 nt8.06□□□□□ -1.12
SSU72P53538 POM34YLR018C 900 nt8.06□□□□□ -1.12
SSU72P53538 YHL019W-AYHL019W-A 594 nt8.05□□□□□ -1.12
SSU72P53538 HXK1YFR053C 1458 nt8.05□□□□□ -1.12
SSU72P53538 UTR1YJR049C 1593 nt8.05□□□□□ -1.12
SSU72P53538 UBA4YHR111W 1323 nt8.04□□□□□ -1.12
SSU72P53538 YCR087WYCR087W 516 nt8.04□□□□□ -1.12
SSU72P53538 THI74YDR438W 1113 nt8.04□□□□□ -1.12
SSU72P53538 PAU16YKL224C 372 nt8.04□□□□□ -1.12
SSU72P53538 SHH4YLR164W 507 nt8.03□□□□□ -1.12
SSU72P53538 NAT4YMR069W 858 nt8.03□□□□□ -1.12
SSU72P53538 PHO89YBR296C 1725 nt8.03□□□□□ -1.12
SSU72P53538 YSR3YKR053C 1215 nt8.02□□□□□ -1.13
SSU72P53538 HIF1YLL022C 1158 nt8.02□□□□□ -1.13
SSU72P53538 MUP1YGR055W 1725 nt8.01□□□□□ -1.13
SSU72P53538 YHL008CYHL008C 1884 nt8.01□□□□□ -1.13
SSU72P53538 INA1YLR413W 2028 nt8.01□□□□□ -1.13
SSU72P53538 SFA1YDL168W 1161 nt8□□□□□ -1.13
SSU72P53538 MRP20YDR405W 792 nt8□□□□□ -1.13
SSU72P53538 YDR510C-AYDR510C-A 117 nt7.99□□□□□ -1.13
SSU72P53538 TOM6YOR045W 186 nt7.98□□□□□ -1.13
SSU72P53538 ALD5YER073W 1563 nt7.97□□□□□ -1.13
SSU72P53538 MSF1YPR047W 1410 nt7.96□□□□□ -1.13
SSU72P53538 RPC82YPR190C 1965 nt7.96□□□□□ -1.14
SSU72P53538 ZRT3YKL175W 1512 nt7.95□□□□□ -1.14
SSU72P53538 CLB6YGR109C 1143 nt7.95□□□□□ -1.14
SSU72P53538 TOM71YHR117W 1920 nt7.95□□□□□ -1.14
SSU72P53538 DIF1YLR437C 402 nt7.94□□□□□ -1.14
SSU72P53538 MET28YIR017C 564 nt7.92□□□□□ -1.14
SSU72P53538 PEX2YJL210W 816 nt7.92□□□□□ -1.14
SSU72P53538 TIF6YPR016C 738 nt7.92□□□□□ -1.14
SSU72P53538 YLR173WYLR173W 1827 nt7.92□□□□□ -1.14
SSU72P53538 UTH1YKR042W 1098 nt7.91□□□□□ -1.14
SSU72P53538 COQ2YNR041C 1119 nt7.91□□□□□ -1.14
SSU72P53538 TPN1YGL186C 1740 nt7.91□□□□□ -1.14
SSU72P53538 HIP1YGR191W 1812 nt7.91□□□□□ -1.14
SSU72P53538 GNP1YDR508C 1992 nt7.91□□□□□ -1.14
SSU72P53538 RPL4BYDR012W 1089 nt7.9□□□□□ -1.14
SSU72P53538 YAR028WYAR028W 705 nt7.9□□□□□ -1.14
SSU72P53538 RPL4AYBR031W 1089 nt7.9□□□□□ -1.14
SSU72P53538 HXT1YHR094C 1713 nt7.89□□□□□ -1.15
SSU72P53538 YGL034CYGL034C 366 nt7.89□□□□□ -1.15
SSU72P53538 AIM45YPR004C 1035 nt7.89□□□□□ -1.15
SSU72P53538 XYL2YLR070C 1071 nt7.88□□□□□ -1.15
SSU72P53538 FIT3YOR383C 615 nt7.87□□□□□ -1.15
SSU72P53538 SED1YDR077W 1017 nt7.85□□□□□ -1.15
SSU72P53538 DBP1YPL119C 1854 nt7.85□□□□□ -1.15
SSU72P53538 LIP1YMR298W 453 nt7.84□□□□□ -1.15
SSU72P53538 MTO1YGL236C 2010 nt7.84□□□□□ -1.15
SSU72P53538 RTG2YGL252C 1767 nt7.84□□□□□ -1.15
SSU72P53538 YMR209CYMR209C 1374 nt7.83□□□□□ -1.16
SSU72P53538 ILV3YJR016C 1758 nt7.82□□□□□ -1.16
SSU72P53538 MEP3YPR138C 1470 nt7.81□□□□□ -1.16
SSU72P53538 ALP1YNL270C 1722 nt7.81□□□□□ -1.16
SSU72P53538 RPS14BYJL191W 417 nt7.8□□□□□ -1.16
SSU72P53538 RBG1YAL036C 1110 nt7.79□□□□□ -1.16
SSU72P53538 AKR2YOR034C 2250 nt7.78□□□□□ -1.16
SSU72P53538 SAM1YLR180W 1149 nt7.78□□□□□ -1.16
SSU72P53538 HOL1YNR055C 1761 nt7.78□□□□□ -1.16
SSU72P53538 MTG2YHR168W 1557 nt7.77□□□□□ -1.17
SSU72P53538 SHY1YGR112W 1170 nt7.77□□□□□ -1.17
SSU72P53538 YJL067WYJL067W 351 nt7.76□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms