Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 AVT6YER119C 1347 nt7.88□□□□□ -1.15
CDC40P40968 GOR1YNL274C 1053 nt7.88□□□□□ -1.15
CDC40P40968 AHT1YHR093W 549 nt7.87□□□□□ -1.15
CDC40P40968 YNL024CYNL024C 741 nt7.86□□□□□ -1.15
CDC40P40968 ZRT3YKL175W 1512 nt7.86□□□□□ -1.15
CDC40P40968 ALG3YBL082C 1377 nt7.85□□□□□ -1.15
CDC40P40968 YPR064WYPR064W 420 nt7.85□□□□□ -1.15
CDC40P40968 FRA1YLL029W 2250 nt7.84□□□□□ -1.15
CDC40P40968 GNP1YDR508C 1992 nt7.84□□□□□ -1.15
CDC40P40968 CCT4YDL143W 1587 nt7.84□□□□□ -1.15
CDC40P40968 HUA1YGR268C 597 nt7.83□□□□□ -1.16
CDC40P40968 YDR306CYDR306C 1437 nt7.83□□□□□ -1.16
CDC40P40968 YJL067WYJL067W 351 nt7.82□□□□□ -1.16
CDC40P40968 URA8YJR103W 1737 nt7.82□□□□□ -1.16
CDC40P40968 ILV3YJR016C 1758 nt7.82□□□□□ -1.16
CDC40P40968 UGP1YKL035W 1500 nt7.8□□□□□ -1.16
CDC40P40968 TAD3YLR316C 969 nt7.79□□□□□ -1.16
CDC40P40968 YOR325WYOR325W 474 nt7.79□□□□□ -1.16
CDC40P40968 SWC5YBR231C 912 nt7.79□□□□□ -1.16
CDC40P40968 YHL008CYHL008C 1884 nt7.79□□□□□ -1.16
CDC40P40968 HIS2YFR025C 1008 nt7.78□□□□□ -1.16
CDC40P40968 PUS7YOR243C 2031 nt7.77□□□□□ -1.17
CDC40P40968 ARP6YLR085C 1317 nt7.77□□□□□ -1.17
CDC40P40968 COQ8YGL119W 1506 nt7.76□□□□□ -1.17
CDC40P40968 PSD1YNL169C 1503 nt7.73□□□□□ -1.17
CDC40P40968 UTR1YJR049C 1593 nt7.73□□□□□ -1.17
CDC40P40968 YIL100C-AYIL100C-A 339 nt7.69□□□□□ -1.18
CDC40P40968 tL(GAG)GtL(GAG)G 82 nt7.68□□□□□ -1.18
CDC40P40968 ARO8YGL202W 1503 nt7.68□□□□□ -1.18
CDC40P40968 NBP35YGL091C 987 nt7.67□□□□□ -1.18
CDC40P40968 BDH1YAL060W 1149 nt7.67□□□□□ -1.18
CDC40P40968 YLR415CYLR415C 339 nt7.67□□□□□ -1.18
CDC40P40968 THI72YOR192C 1800 nt7.66□□□□□ -1.18
CDC40P40968 OPI10YOL032W 741 nt7.66□□□□□ -1.18
CDC40P40968 NRT1YOR071C 1797 nt7.66□□□□□ -1.18
CDC40P40968 SGA1YIL099W 1650 nt7.64□□□□□ -1.19
CDC40P40968 HXK1YFR053C 1458 nt7.64□□□□□ -1.19
CDC40P40968 KES1YPL145C 1305 nt7.64□□□□□ -1.19
CDC40P40968 SAM35YHR083W 990 nt7.64□□□□□ -1.19
CDC40P40968 CYT1YOR065W 930 nt7.64□□□□□ -1.19
CDC40P40968 DAT1YML113W 747 nt7.63□□□□□ -1.19
CDC40P40968 YDR094WYDR094W 336 nt7.62□□□□□ -1.19
CDC40P40968 ALD5YER073W 1563 nt7.62□□□□□ -1.19
CDC40P40968 DMA2YNL116W 1569 nt7.62□□□□□ -1.19
CDC40P40968 RSC8YFR037C 1674 nt7.61□□□□□ -1.19
CDC40P40968 SHM2YLR058C 1410 nt7.61□□□□□ -1.19
CDC40P40968 BET2YPR176C 978 nt7.6□□□□□ -1.19
CDC40P40968 Q0010Q0010 387 nt7.6□□□□□ -1.19
CDC40P40968 YLR173WYLR173W 1827 nt7.59□□□□□ -1.19
CDC40P40968 CCT2YIL142W 1584 nt7.59□□□□□ -1.19
CDC40P40968 TIM17YJL143W 477 nt7.59□□□□□ -1.19
CDC40P40968 YSP3YOR003W 1437 nt7.59□□□□□ -1.19
CDC40P40968 ZAP1YJL056C 2643 nt7.58□□□□□ -1.2
CDC40P40968 DBP1YPL119C 1854 nt7.56□□□□□ -1.2
CDC40P40968 SHY1YGR112W 1170 nt7.56□□□□□ -1.2
CDC40P40968 GAP1YKR039W 1809 nt7.56□□□□□ -1.2
CDC40P40968 HXT1YHR094C 1713 nt7.55□□□□□ -1.2
CDC40P40968 LSB6YJL100W 1824 nt7.55□□□□□ -1.2
CDC40P40968 YCR102CYCR102C 1107 nt7.55□□□□□ -1.2
CDC40P40968 YFR018CYFR018C 1092 nt7.55□□□□□ -1.2
CDC40P40968 YHR218WYHR218W 1812 nt7.55□□□□□ -1.2
CDC40P40968 CWC15YDR163W 528 nt7.53□□□□□ -1.2
CDC40P40968 NIT1YIL164C 600 nt7.53□□□□□ -1.2
CDC40P40968 NSG2YNL156C 900 nt7.52□□□□□ -1.21
CDC40P40968 YNL115CYNL115C 1935 nt7.51□□□□□ -1.21
CDC40P40968 ODC1YPL134C 933 nt7.5□□□□□ -1.21
CDC40P40968 PEX25YPL112C 1185 nt7.49□□□□□ -1.21
CDC40P40968 MRP20YDR405W 792 nt7.48□□□□□ -1.21
CDC40P40968 MEP3YPR138C 1470 nt7.48□□□□□ -1.21
CDC40P40968 LSC2YGR244C 1284 nt7.47□□□□□ -1.21
CDC40P40968 YOR072WYOR072W 315 nt7.47□□□□□ -1.21
CDC40P40968 RRT5YFR032C 870 nt7.46□□□□□ -1.22
CDC40P40968 PCP1YGR101W 1041 nt7.46□□□□□ -1.22
CDC40P40968 SGT2YOR007C 1041 nt7.46□□□□□ -1.22
CDC40P40968 VPS75YNL246W 795 nt7.45□□□□□ -1.22
CDC40P40968 ZTA1YBR046C 1005 nt7.44□□□□□ -1.22
CDC40P40968 YFL066CYFL066C 1179 nt7.43□□□□□ -1.22
CDC40P40968 YRF1-3YGR296W 5580 nt7.42□□□□□ -1.22
CDC40P40968 YRF1-6YNL339C 5580 nt7.42□□□□□ -1.22
CDC40P40968 YRF1-7YPL283C 5580 nt7.42□□□□□ -1.22
CDC40P40968 QDR2YIL121W 1629 nt7.42□□□□□ -1.22
CDC40P40968 PRO1YDR300C 1287 nt7.42□□□□□ -1.22
CDC40P40968 URA6YKL024C 615 nt7.42□□□□□ -1.22
CDC40P40968 YBL086CYBL086C 1401 nt7.42□□□□□ -1.22
CDC40P40968 SSL2YIL143C 2532 nt7.41□□□□□ -1.22
CDC40P40968 TIR3YIL011W 810 nt7.41□□□□□ -1.22
CDC40P40968 DIF1YLR437C 402 nt7.41□□□□□ -1.22
CDC40P40968 YJR154WYJR154W 1041 nt7.4□□□□□ -1.22
CDC40P40968 SHH4YLR164W 507 nt7.4□□□□□ -1.22
CDC40P40968 HXT10YFL011W 1641 nt7.4□□□□□ -1.22
CDC40P40968 TOM71YHR117W 1920 nt7.39□□□□□ -1.23
CDC40P40968 GID8YMR135C 1368 nt7.39□□□□□ -1.23
CDC40P40968 SNU66YOR308C 1764 nt7.38□□□□□ -1.23
CDC40P40968 SFL1YOR140W 2301 nt7.38□□□□□ -1.23
CDC40P40968 MTO1YGL236C 2010 nt7.38□□□□□ -1.23
CDC40P40968 UFO1YML088W 2007 nt7.38□□□□□ -1.23
CDC40P40968 MEX67YPL169C 1800 nt7.38□□□□□ -1.23
CDC40P40968 MDL2YPL270W 2322 nt7.38□□□□□ -1.23
CDC40P40968 MRS6YOR370C 1812 nt7.37□□□□□ -1.23
CDC40P40968 MDM35YKL053C-A 261 nt7.37□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms