Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 COQ2YNR041C 1119 nt10.94□□□□□ -0.66
VPS35P34110 CLB6YGR109C 1143 nt10.93□□□□□ -0.66
VPS35P34110 RDN18-1RDN18-1 1800 nt10.9□□□□□ -0.66
VPS35P34110 RDN18-2RDN18-2 1800 nt10.9□□□□□ -0.66
VPS35P34110 DPS1YLL018C 1674 nt10.89□□□□□ -0.67
VPS35P34110 RPL4BYDR012W 1089 nt10.89□□□□□ -0.67
VPS35P34110 LSC2YGR244C 1284 nt10.89□□□□□ -0.67
VPS35P34110 RPL4AYBR031W 1089 nt10.89□□□□□ -0.67
VPS35P34110 YKR005CYKR005C 1578 nt10.88□□□□□ -0.67
VPS35P34110 YML089CYML089C 369 nt10.87□□□□□ -0.67
VPS35P34110 POM34YLR018C 900 nt10.84□□□□□ -0.67
VPS35P34110 SHH4YLR164W 507 nt10.84□□□□□ -0.67
VPS35P34110 YMR226CYMR226C 804 nt10.84□□□□□ -0.67
VPS35P34110 SNF1YDR477W 1902 nt10.82□□□□□ -0.68
VPS35P34110 RTN2YDL204W 1182 nt10.82□□□□□ -0.68
VPS35P34110 UTH1YKR042W 1098 nt10.82□□□□□ -0.68
VPS35P34110 TOM6YOR045W 186 nt10.82□□□□□ -0.68
VPS35P34110 RBG2YGR173W 1107 nt10.8□□□□□ -0.68
VPS35P34110 AAC1YMR056C 930 nt10.8□□□□□ -0.68
VPS35P34110 PRO1YDR300C 1287 nt10.79□□□□□ -0.68
VPS35P34110 ARP6YLR085C 1317 nt10.79□□□□□ -0.68
VPS35P34110 YLR111WYLR111W 333 nt10.78□□□□□ -0.68
VPS35P34110 SDH5YOL071W 489 nt10.78□□□□□ -0.68
VPS35P34110 ATG15YCR068W 1563 nt10.77□□□□□ -0.68
VPS35P34110 YGR259CYGR259C 441 nt10.77□□□□□ -0.69
VPS35P34110 RPS14BYJL191W 417 nt10.77□□□□□ -0.69
VPS35P34110 PEX2YJL210W 816 nt10.77□□□□□ -0.69
VPS35P34110 BIO5YNR056C 1686 nt10.76□□□□□ -0.69
VPS35P34110 HIP1YGR191W 1812 nt10.75□□□□□ -0.69
VPS35P34110 NRT1YOR071C 1797 nt10.75□□□□□ -0.69
VPS35P34110 MET28YIR017C 564 nt10.74□□□□□ -0.69
VPS35P34110 BMT6YLR063W 1098 nt10.72□□□□□ -0.69
VPS35P34110 GAP1YKR039W 1809 nt10.71□□□□□ -0.69
VPS35P34110 TSC10YBR265W 963 nt10.7□□□□□ -0.7
VPS35P34110 TIF6YPR016C 738 nt10.69□□□□□ -0.7
VPS35P34110 RAD23YEL037C 1197 nt10.68□□□□□ -0.7
VPS35P34110 PLB1YMR008C 1995 nt10.68□□□□□ -0.7
VPS35P34110 NAR1YNL240C 1476 nt10.67□□□□□ -0.7
VPS35P34110 FIT3YOR383C 615 nt10.66□□□□□ -0.7
VPS35P34110 PAU21YOR394W 495 nt10.64□□□□□ -0.71
VPS35P34110 PAU22YPL282C 495 nt10.64□□□□□ -0.71
VPS35P34110 FRE6YLL051C 2139 nt10.64□□□□□ -0.71
VPS35P34110 IRC24YIR036C 792 nt10.63□□□□□ -0.71
VPS35P34110 YJR154WYJR154W 1041 nt10.62□□□□□ -0.71
VPS35P34110 YGR012WYGR012W 1182 nt10.61□□□□□ -0.71
VPS35P34110 HSL7YBR133C 2484 nt10.6□□□□□ -0.71
VPS35P34110 PBP1YGR178C 2169 nt10.59□□□□□ -0.71
VPS35P34110 Q0010Q0010 387 nt10.58□□□□□ -0.72
VPS35P34110 SAM35YHR083W 990 nt10.57□□□□□ -0.72
VPS35P34110 YAR028WYAR028W 705 nt10.54□□□□□ -0.72
VPS35P34110 ARO7YPR060C 771 nt10.54□□□□□ -0.72
VPS35P34110 UTR1YJR049C 1593 nt10.53□□□□□ -0.72
VPS35P34110 RIB3YDR487C 627 nt10.53□□□□□ -0.72
VPS35P34110 YLR279WYLR279W 390 nt10.53□□□□□ -0.72
VPS35P34110 DIF1YLR437C 402 nt10.53□□□□□ -0.72
VPS35P34110 SAM1YLR180W 1149 nt10.51□□□□□ -0.73
VPS35P34110 YPL222C-AYPL222C-A 246 nt10.51□□□□□ -0.73
VPS35P34110 ALP1YNL270C 1722 nt10.5□□□□□ -0.73
VPS35P34110 CYT2YKL087C 675 nt10.49□□□□□ -0.73
VPS35P34110 YLR437C-AYLR437C-A 228 nt10.49□□□□□ -0.73
VPS35P34110 MSB4YOL112W 1479 nt10.45□□□□□ -0.74
VPS35P34110 AKR2YOR034C 2250 nt10.44□□□□□ -0.74
VPS35P34110 RPM1RPM1 483 nt10.43□□□□□ -0.74
VPS35P34110 MTG2YHR168W 1557 nt10.42□□□□□ -0.74
VPS35P34110 CMP2YML057W 1815 nt10.42□□□□□ -0.74
VPS35P34110 PRM5YIL117C 957 nt10.41□□□□□ -0.74
VPS35P34110 RDN25-1RDN25-1 3396 nt10.4□□□□□ -0.75
VPS35P34110 RDN25-2RDN25-2 3396 nt10.4□□□□□ -0.75
VPS35P34110 ZTA1YBR046C 1005 nt10.38□□□□□ -0.75
VPS35P34110 SED1YDR077W 1017 nt10.37□□□□□ -0.75
VPS35P34110 CAB5YDR196C 726 nt10.37□□□□□ -0.75
VPS35P34110 ALD4YOR374W 1560 nt10.36□□□□□ -0.75
VPS35P34110 YAT1YAR035W 2064 nt10.36□□□□□ -0.75
VPS35P34110 GND1YHR183W 1470 nt10.36□□□□□ -0.75
VPS35P34110 HEL2YDR266C 1920 nt10.33□□□□□ -0.76
VPS35P34110 YPI1YFR003C 468 nt10.33□□□□□ -0.76
VPS35P34110 LOT5YKL183W 921 nt10.33□□□□□ -0.76
VPS35P34110 HIF1YLL022C 1158 nt10.32□□□□□ -0.76
VPS35P34110 LIP1YMR298W 453 nt10.32□□□□□ -0.76
VPS35P34110 YEL009C-AYEL009C-A 408 nt10.31□□□□□ -0.76
VPS35P34110 APT2YDR441C 546 nt10.3□□□□□ -0.76
VPS35P34110 HXT1YHR094C 1713 nt10.28□□□□□ -0.76
VPS35P34110 YER190C-AYER190C-A 576 nt10.28□□□□□ -0.76
VPS35P34110 YGR296C-AYGR296C-A 576 nt10.28□□□□□ -0.76
VPS35P34110 YML133W-AYML133W-A 576 nt10.28□□□□□ -0.76
VPS35P34110 YNL339W-AYNL339W-A 576 nt10.28□□□□□ -0.76
VPS35P34110 YPL283W-AYPL283W-A 576 nt10.28□□□□□ -0.76
VPS35P34110 PAB1YER165W 1734 nt10.27□□□□□ -0.76
VPS35P34110 FCY21YER060W 1587 nt10.27□□□□□ -0.76
VPS35P34110 SMM1YNR015W 1155 nt10.26□□□□□ -0.77
VPS35P34110 YJL195CYJL195C 702 nt10.25□□□□□ -0.77
VPS35P34110 DBP1YPL119C 1854 nt10.25□□□□□ -0.77
VPS35P34110 ADH1YOL086C 1047 nt10.24□□□□□ -0.77
VPS35P34110 FUN14YAL008W 597 nt10.23□□□□□ -0.77
VPS35P34110 LSB3YFR024C-A 1380 nt10.21□□□□□ -0.78
VPS35P34110 STE4YOR212W 1272 nt10.19□□□□□ -0.78
VPS35P34110 YBL086CYBL086C 1401 nt10.18□□□□□ -0.78
VPS35P34110 TOA2YKL058W 369 nt10.18□□□□□ -0.78
VPS35P34110 YNR029CYNR029C 1290 nt10.18□□□□□ -0.78
VPS35P34110 BRR1YPR057W 1026 nt10.18□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 131.3 ms