Protein–RNA interactions for Protein: P05455

SSB, Lupus La protein, humanhuman

Known RBP eCLIP

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP05455 NCAPD2-202ENST00000382457 2844 ntTSL 511.9□□□□□ -0.59e-10■■■□□ 17.5
SSBP05455 NCAPD2-208ENST00000539714 533 ntTSL 37.7□□□□□ -1.189e-10■■■□□ 17.5
SSBP05455 NCAPD2-210ENST00000541399 584 ntTSL 57.41□□□□□ -1.229e-10■■■□□ 17.5
SSBP05455 SCARNA10-201ENST00000459255 330 ntBASIC5.12□□□□□ -1.599e-10■■■□□ 17.5
SSBP05455 MICALL2-204ENST00000467394 2080 ntTSL 222.29■■□□□ 1.164e-9■■■□□ 17
SSBP05455 MICALL2-211ENST00000487156 874 ntTSL 521.27■■□□□ 14e-9■■■□□ 17
SSBP05455 MICALL2-208ENST00000472100 5248 ntTSL 220.94■□□□□ 0.944e-9■■■□□ 17
SSBP05455 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.514e-9■■■□□ 17
SSBP05455 MICALL2-202ENST00000413446 3046 ntTSL 215.04■□□□□ -04e-9■■■□□ 17
SSBP05455 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.593e-10■■■□□ 17
SSBP05455 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.89■□□□□ 0.613e-10■■■□□ 17
SSBP05455 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.77■□□□□ 0.283e-10■■■□□ 17
SSBP05455 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.37■□□□□ 0.053e-10■■■□□ 17
SSBP05455 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.11■□□□□ 0.013e-10■■■□□ 17
SSBP05455 PCK2-207ENST00000559171 508 ntTSL 314.98□□□□□ -0.013e-10■■■□□ 17
SSBP05455 PCK2-209ENST00000559503 826 ntTSL 511.57□□□□□ -0.563e-10■■■□□ 17
SSBP05455 RPL7A-205ENST00000468019 941 ntTSL 214.4□□□□□ -0.12e-20■■■□□ 16.9
SSBP05455 RPL7A-207ENST00000489392 966 ntTSL 511.55□□□□□ -0.562e-20■■■□□ 16.9
SSBP05455 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC9.75□□□□□ -0.852e-20■■■□□ 16.9
SSBP05455 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.192e-20■■■□□ 16.9
SSBP05455 RPL7A-204ENST00000463740 1164 ntTSL 57.56□□□□□ -1.22e-20■■■□□ 16.9
SSBP05455 SNORD36C-201ENST00000516733 66 ntBASIC2.26□□□□□ -2.052e-20■■■□□ 16.9
SSBP05455 HEATR3-205ENST00000569324 746 ntTSL 224.05■■□□□ 1.443e-8■■■□□ 16.4
SSBP05455 HEATR3-203ENST00000561819 468 ntTSL 323.37■■□□□ 1.333e-8■■■□□ 16.4
SSBP05455 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.333e-8■■■□□ 16.4
SSBP05455 UBAC2-204ENST00000457666 627 ntTSL 320.15■□□□□ 0.822e-8■■■□□ 16.3
SSBP05455 UBAC2-201ENST00000355700 748 ntTSL 318.97■□□□□ 0.632e-8■■■□□ 16.3
SSBP05455 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.572e-8■■■□□ 16.3
SSBP05455 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.17■□□□□ 0.342e-8■■■□□ 16.3
SSBP05455 UBAC2-206ENST00000468067 968 ntTSL 213.2□□□□□ -0.32e-8■■■□□ 16.3
SSBP05455 RN7SKP9-201ENST00000364923 299 ntBASIC12.95□□□□□ -0.342e-8■■■□□ 16.3
SSBP05455 UBAC2-207ENST00000473091 610 ntTSL 411.91□□□□□ -0.52e-8■■■□□ 16.3
SSBP05455 C14orf37-203ENST00000554218 572 ntTSL 48.84□□□□□ -0.999e-11■■■□□ 16.1
SSBP05455 EIF4A2-215ENST00000467585 570 ntTSL 214.39□□□□□ -0.111e-9■■■□□ 16.1
SSBP05455 EIF4A2-208ENST00000445596 600 ntTSL 214.18□□□□□ -0.141e-9■■■□□ 16.1
SSBP05455 EIF4A2-227ENST00000498746 579 ntTSL 212.29□□□□□ -0.441e-9■■■□□ 16.1
SSBP05455 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.621e-9■■■□□ 16.1
SSBP05455 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)8.62□□□□□ -1.031e-9■■■□□ 16.1
SSBP05455 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)8.55□□□□□ -1.041e-9■■■□□ 16.1
SSBP05455 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.111e-9■■■□□ 16.1
SSBP05455 EIF4A2-211ENST00000465222 676 ntTSL 27.13□□□□□ -1.271e-9■■■□□ 16.1
SSBP05455 EIF4A2-218ENST00000475653 909 ntTSL 27.12□□□□□ -1.271e-9■■■□□ 16.1
SSBP05455 EIF4A2-204ENST00000429589 1005 ntTSL 56.98□□□□□ -1.291e-9■■■□□ 16.1
SSBP05455 EIF4A2-210ENST00000465032 578 ntTSL 26.98□□□□□ -1.291e-9■■■□□ 16.1
SSBP05455 EIF4A2-212ENST00000465267 1054 ntTSL 26.98□□□□□ -1.291e-9■■■□□ 16.1
SSBP05455 EIF4A2-224ENST00000495049 576 ntTSL 26.98□□□□□ -1.291e-9■■■□□ 16.1
SSBP05455 EIF4A2-202ENST00000425053 1977 ntTSL 56.5□□□□□ -1.371e-9■■■□□ 16.1
SSBP05455 EIF4A2-221ENST00000491473 579 ntTSL 26.33□□□□□ -1.41e-9■■■□□ 16.1
SSBP05455 EIF4A2-219ENST00000485101 5327 ntTSL 54.77□□□□□ -1.651e-9■■■□□ 16.1
SSBP05455 EIF4A2-220ENST00000486805 590 ntTSL 23.91□□□□□ -1.781e-9■■■□□ 16.1
SSBP05455 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.24■□□□□ 0.194e-7■■■□□ 15.9
SSBP05455 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC12.5□□□□□ -0.414e-7■■■□□ 15.9
SSBP05455 GAS5-224ENST00000454068 688 ntTSL 5 BASIC10.94□□□□□ -0.664e-7■■■□□ 15.9
SSBP05455 GAS5-214ENST00000436656 822 ntTSL 310.44□□□□□ -0.744e-7■■■□□ 15.9
SSBP05455 GAS5-210ENST00000431268 1698 ntTSL 29.77□□□□□ -0.854e-7■■■□□ 15.9
SSBP05455 GAS5-219ENST00000449289 542 ntTSL 3 BASIC9.04□□□□□ -0.964e-7■■■□□ 15.9
SSBP05455 GAS5-220ENST00000449589 712 ntTSL 39.04□□□□□ -0.964e-7■■■□□ 15.9
SSBP05455 GAS5-228ENST00000456812 723 ntTSL 37.66□□□□□ -1.184e-7■■■□□ 15.9
SSBP05455 GAS5-206ENST00000422183 745 ntTSL 26.78□□□□□ -1.324e-7■■■□□ 15.9
SSBP05455 GAS5-215ENST00000442067 1114 ntTSL 26.75□□□□□ -1.334e-7■■■□□ 15.9
SSBP05455 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.51□□□□□ -1.374e-7■■■□□ 15.9
SSBP05455 GAS5-201ENST00000412059 979 ntTSL 56.16□□□□□ -1.424e-7■■■□□ 15.9
SSBP05455 GAS5-205ENST00000422008 497 ntTSL 35.34□□□□□ -1.554e-7■■■□□ 15.9
SSBP05455 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.76□□□□□ -1.654e-7■■■□□ 15.9
SSBP05455 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.32□□□□□ -1.724e-7■■■□□ 15.9
SSBP05455 GAS5-213ENST00000436285 772 ntTSL 23.98□□□□□ -1.774e-7■■■□□ 15.9
SSBP05455 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.031e-10■■■□□ 15.7
SSBP05455 SCARNA7-201ENST00000458797 330 ntBASIC11.58□□□□□ -0.561e-10■■■□□ 15.7
SSBP05455 KPNA4-203ENST00000483437 510 ntTSL 56.63□□□□□ -1.351e-10■■■□□ 15.7
SSBP05455 ELF1-202ENST00000405737 903 ntTSL 219.18■□□□□ 0.668e-10■■■□□ 15.6
SSBP05455 RNASE11-203ENST00000413502 791 ntTSL 214.61□□□□□ -0.074e-8■■■□□ 15.3
SSBP05455 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.384e-8■■■□□ 15.3
SSBP05455 RPL7A-208ENST00000492798 374 ntTSL 1 (best)7.56□□□□□ -1.26e-29■■■□□ 15.2
SSBP05455 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.778e-30■■■□□ 15.2
SSBP05455 SNORD94-201ENST00000386037 137 ntBASIC7.49□□□□□ -1.218e-30■■■□□ 15.2
SSBP05455 PTCD3-216ENST00000487043 1054 ntTSL 35.99□□□□□ -1.458e-30■■■□□ 15.2
SSBP05455 UQCRC1-202ENST00000412343 778 ntTSL 323.76■■□□□ 1.392e-6■■■□□ 15
SSBP05455 UQCRC1-206ENST00000467690 931 ntTSL 222.2■■□□□ 1.142e-6■■■□□ 15
SSBP05455 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.762e-6■■■□□ 15
SSBP05455 UQCRC1-203ENST00000415995 1387 ntTSL 517.89■□□□□ 0.452e-6■■■□□ 15
SSBP05455 UQCRC1-205ENST00000463708 739 ntTSL 314.52□□□□□ -0.092e-6■■■□□ 15
SSBP05455 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.522e-7■■■□□ 14.7
SSBP05455 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.192e-7■■■□□ 14.6
SSBP05455 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.212e-7■■■□□ 14.6
SSBP05455 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC11.11□□□□□ -0.632e-7■■■□□ 14.6
SSBP05455 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC11.03□□□□□ -0.642e-7■■■□□ 14.6
SSBP05455 EIF4A1-216ENST00000580888 710 ntTSL 219.66■□□□□ 0.749e-56■■■□□ 14.6
SSBP05455 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.29■□□□□ 0.689e-56■■■□□ 14.6
SSBP05455 EIF4A1-207ENST00000578324 1577 ntTSL 517.86■□□□□ 0.459e-56■■■□□ 14.6
SSBP05455 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.419e-56■■■□□ 14.6
SSBP05455 EIF4A1-228ENST00000583389 951 ntTSL 316.16■□□□□ 0.189e-56■■■□□ 14.6
SSBP05455 EIF4A1-235ENST00000584860 1109 ntTSL 315.19■□□□□ 0.029e-56■■■□□ 14.6
SSBP05455 SNORD10-201ENST00000459579 142 ntBASIC13.48□□□□□ -0.259e-56■■■□□ 14.6
SSBP05455 EIF4A1-236ENST00000584901 1021 ntTSL 212.85□□□□□ -0.359e-56■■■□□ 14.6
SSBP05455 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC12.82□□□□□ -0.369e-56■■■□□ 14.6
SSBP05455 EIF4A1-218ENST00000581544 1444 ntTSL 212.64□□□□□ -0.399e-56■■■□□ 14.6
SSBP05455 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.479e-56■■■□□ 14.6
SSBP05455 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC11.99□□□□□ -0.499e-56■■■□□ 14.6
SSBP05455 EIF4A1-229ENST00000583802 563 ntTSL 411.98□□□□□ -0.499e-56■■■□□ 14.6
SSBP05455 EIF4A1-217ENST00000581384 642 ntTSL 511.2□□□□□ -0.629e-56■■■□□ 14.6
Retrieved 100 of 672 protein–RNA pairs in 134.1 ms